Ipomoea triloba (trilobed morning glory): 116011199
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Entry
116011199 CDS
T07384
Name
(RefSeq) autophagy-related protein 18c-like
KO
K22991
WD repeat-containing protein 45
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116011199
Membrane trafficking [BR:
itr04131
]
Autophagy
Other autophagy associated proteins
Others
116011199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
Beta-prop_EML
Beta-prop_Vps41
ANAPC4_WD40
WDR55
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT80_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
116011199
NCBI-ProteinID:
XP_031106593
LinkDB
All DBs
Position
1:25849769..25851755
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AA seq
354 aa
AA seq
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XAGTSRGFRIYNCDPFKETFRRDIKSGGFGIVEMLFRCNILALVGARTNTQYPPNKVIIW
DDHQSRCIGEFSFRSEVRAVKLRRDRVVVVLEYKIYVYNFMDLKLLHQIETLENPRGLCC
LSHYSNTSVLACPGLRRGQVRVEHFGLNMTKLIKAHDSQIACLTLTMDGLLLATASTKGT
LIRIFNTMDGTQLQEVRRGVDKADIYSIALSPNVQWLSVSSDKGTIHVYSLRVRIVGEDV
ATDSSTVGNQALLYQQHSSTSLDALISPSTGANPGSSLSFMRGVLPRYFSSEWSFAQFHL
PECTQFIAAFGSQNTVIIAGMDGSFYRCSFDPVNGGAMAQQEYVCFLKTESRPR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
tntgctggcacaagtcgaggttttcgtatatataactgtgatcccttcaaggagactttc
agacgtgatatcaaaagtggaggctttgggattgttgaaatgctattccgttgcaatatt
ttagcactcgttggtgctagaaccaatactcaatatcctccaaacaaagttattatttgg
gatgatcatcagagcaggtgcattggtgagttttcatttagatctgaggttcgtgctgtg
aaactacgacgggatcgcgttgttgttgttcttgaatacaagatatatgtctacaatttt
atggacctaaagcttcttcatcagatagagactttggagaatcctaggggactttgctgc
ctgtcacactactcaaatacatcagtattggcttgtccaggccttcgacgaggacaagtt
cgtgttgagcattttggcctgaacatgacaaaattaatcaaggctcatgattctcagata
gcatgcttaaccttgacaatggatgggcttcttcttgccacggctagcaccaagggcact
ttgataagaattttcaatacaatggatgggactcagttgcaagaggtacgcagaggtgta
gacaaagccgatatctacagtatagcactatcaccaaatgttcagtggttgtcggtttct
agtgacaaaggtactattcatgtatacagcctaagagtgcgaattgttggggaggatgtt
gcgactgatagcagcactgttggaaatcaagcgctgttgtatcaacagcattcatcaact
tcacttgatgctcttatttctccaagcaccggtgccaaccctggctcgtcattgtcattc
atgagaggggttttaccaaggtattttagctcggagtggtcatttgctcagtttcacttg
ccagagtgtacccaattcatcgctgcatttggttctcagaacactgttattatcgctggc
atggacgggagtttctacaggtgtagctttgaccctgtgaatggaggggctatggcgcag
caagaatatgtttgctttctgaaaacagagagtagacctagatag
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