Ipomoea triloba (trilobed morning glory): 116011279
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Entry
116011279 CDS
T07384
Name
(RefSeq) syntaxin-125-like
KO
K08486
syntaxin 1B/2/3
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116011279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116011279
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
itr04147
]
116011279
Membrane trafficking [BR:
itr04131
]
SNARE
Syntaxin (Qa)
Stx-PM
116011279
Exosome [BR:
itr04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
116011279
Exosomal proteins of other body fluids (saliva and urine)
116011279
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
TMPIT
CCDC-167
STX6_10_61_N
MCPsignal
nsP3_ZBD
BBS2_hp
Synaptobrevin
Laminin_II
DUF3829
DUF6548
DUF7201
DUF7809
Motif
Other DBs
NCBI-GeneID:
116011279
NCBI-ProteinID:
XP_031106691
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All DBs
Position
2:4613329..4614756
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AA seq
314 aa
AA seq
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MNDLFSANSFKRYQTDDLEAGGGDGDAPAAGNNNNNNDESADLNKFFEDVEKVKTDMKDV
ETFYKKLQELNEECKTAHNAKTMKSLRSKMDGDVAQVLKRVKVIKAKLEALEKSNAASRQ
VSGCGPGSSTDRTRTAVVGGLGKKLKVMMDDFQALRARMNSEYKETVARRYFTVTGEQPD
DDLIENLIASGESESFLQKAIQEQGRGQILDTISEIQERHDAVKEIEKNLIELHQIFLDM
AALVEAQGQQLNDIESHVAHASSFVRRGTEQLQEASEIQKESRKCTCIAIILVIVLIIVL
LFPIWSHLLMLHLR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacttattctctgctaactcgtttaagcgctaccaaacggatgatctggaggcg
ggaggcggagacggcgacgccccggcggcggggaataataataataataatgatgaatcc
gcggatctcaacaagtttttcgaggatgtggagaaagtgaagactgacatgaaggatgtg
gagacgttttacaagaagttgcaggagttgaacgaggagtgcaagacggcccacaatgcg
aaaaccatgaagagtttgaggtccaagatggacggtgacgtggcgcaggtcttgaagcgg
gtcaaggtcatcaaggccaagctggaagccctggaaaagtccaacgccgcgtcccgccag
gtgtccgggtgcggcccgggctcttccacggaccggacccgaaccgcggtcgtgggcggg
ctcggcaagaagctaaaagtcatgatggacgacttccaggccctgcgggcccggatgaac
tccgagtacaaggagaccgtggctcggcgatacttcaccgtgacgggcgagcagcccgac
gacgacctaatcgaaaacctaatcgccagcggcgagagcgagtcgttccttcagaaagcc
atccaggaacaagggcggggacagattctggacaccatatcggaaattcaagaaaggcac
gacgcggttaaagagatagagaagaacctgatcgagctccaccagatattcttggacatg
gcggcgctggtggaggcgcaggggcagcagctcaacgacatcgagagccacgtggcgcac
gctagctccttcgtccgccgaggtaccgagcagctccaagaagccagtgagattcagaag
gaatccagaaagtgcacttgcattgccattattctcgtcattgttctcatcatcgtcctt
cttttcccaatttggtcccatcttttgatgcttcatctcaggtag
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