Ipomoea triloba (trilobed morning glory): 116011672
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Entry
116011672 CDS
T07384
Name
(RefSeq) uncharacterized protein LOC116011672
KO
K15082
DNA repair protein RAD7
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
itr03400
]
116011672
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
116011672
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
SAM_Ste50p
LRR_RPS2
LRR_NXF1-5
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
116011672
NCBI-ProteinID:
XP_031106934
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Position
3:16579692..16584250
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AA seq
865 aa
AA seq
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MTVLRSREVVPTPKSVDSLKKRKKEVVEPSTPEKSVEALSNLPGETTPLTGSSRKRSVPP
DAVPRRSLRLAAKFSNAFSDISTASNGCDVGNLKDGDGIEKGGLGLEEKGDKIMGEVGKH
KLVSVVEELKIRRDTVLNNCGDHSREPVECSKEGSRMKRRRMEVDTIRLKAQTEVDTSKR
FLSLRSGKKIMKEVEVNNGGSVFVTGGIEGGQKSSPGKGSEDVPKGSGAPEVLQLISSAV
TNLKLNATMDGEGNLEKKRLTVEEKGKGKVAERTLLMASSSVRFEVDLSNNNKDVTGVNA
TRRLSRNEKGKGVVIDNDLSNDFCTLNKDSGSKVETSHAAEHEATQHGEQIKESTVNVTN
IERGYRKQFRDIAKRSAPRFAHFSSQEEGNLVDEAVRDTQPPKEVLGDWPGPFSTAMKII
QDREKNMDKQTKTGSVPESMVAPLLWNPKKDTQPNQRRKIIPSLRDLCMHVLVKNADGIT
SLDCVPDVLRHKLCNLLCDSRKMNCQFLGLLTSGSPTEIRLTDCSWLTEELFINSFERCG
TSNLAVLQLDQCGRCLPDFTLLATLARLPNSLPALTTISLKGACRLSDVGLSALVSSAPS
LRSINLSQCSLLSSNGIKCLSDSLGSILKELYLDDCEAIDCSLVLPFLLKLEHLEVLSVA
GIPKVCDDFVIEFVTQRGHNMRELVLKDCKKLTDRSVKAVAESCPRLCAIDLSNLFGLTD
YSVGYLANGCRAIHKLKLCRNAFSDEAIAAYLETSGKWLKELSLNNIKKVSHNTAMSLAE
HCRNLVSLDVSWCRNLTDEALGLIADSCLSLEVLKVFGCTQITEVFLDGHSNPQVKIIGR
KLTPVMEHLSLADPLQQGPLLYSSA
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgacggttttgcgatctcgagaagtggttcctacgccgaaatctgtggattcgcttaaa
aaacgtaaaaaagaggtcgtggaaccatcgactccagagaaatctgtggaagcattgagc
aatctgccgggagagaccactccgcttacaggctcttccaggaagcgttcagtacctccg
gatgctgtacctaggcggagtcttagattggctgccaaatttagtaatgctttttctgat
attagtactgctagtaatggatgtgatgtaggaaatttgaaggatggtgatggtattgaa
aaggggggtttgggccttgaagaaaagggagataagatcatgggagaagtgggcaagcat
aaattggttagtgtagttgaggaattaaagataagaagggataccgtgttgaacaattgc
ggtgatcatagcagggaaccagttgaatgttctaaggaaggaagtcggatgaaaagacgg
cgtatggaggtggacacaatacggttgaaagcacaaacagaggttgacacatcaaaaagg
ttcctgagtttgcgctcagggaaaaagattatgaaagaagttgaagtaaataatgggggt
tctgtttttgttactggaggaattgagggtggtcagaagtcctctcctggtaaggggagt
gaggatgtgccaaaaggttccggggccccagaagtcctacagttaatctcttctgcagtg
acaaatttaaagttaaatgccaccatggatggggaaggaaatcttgaaaaaaagagatta
actgtagaagagaaaggtaaaggaaaagttgctgagagaacgttgttaatggcttctagt
tctgtgagatttgaagtggatctctcaaacaataataaagatgttactggtgtcaatgcc
acgaggaggcttagtagaaacgaaaaaggaaaaggagttgtgattgacaatgatttatcc
aatgatttttgcacattgaataaggattctggatctaaagtagaaacaagccatgctgct
gagcatgaagcaacacaacatggagaacagatcaaagagtctactgtgaatgtgactaat
atagaaagaggttacaggaaacagttcagggatatagctaagcgaagtgcgccaagattt
gctcatttctcttcccaggaggaagggaaccttgttgatgaggctgtaagagatactcaa
ccaccaaaagaagtattaggagactggcctgggccgttctcaactgctatgaagattatc
caggatcgtgaaaagaatatggataaacagactaagacgggttctgtcccagaaagtatg
gttgcaccactgttatggaatccaaaaaaggatacgcagcccaatcaaaggagaaagatt
attccctcgttgcgagatctgtgcatgcacgttctggtaaagaatgcagatggaattact
tcacttgattgtgttcctgatgtactcagacacaaactatgcaatctactctgtgattct
aggaaaatgaattgtcagtttcttggacttcttacctctgggtctcctactgagatacgc
ctgacggattgttcgtggttaactgaggagctctttataaattcctttgaaaggtgtgga
accagcaacttagcggtgctacaacttgatcaatgcggtcgctgtttgccagattttacg
cttttagctaccttagctcgcttgccaaatagtttgcctgctctaactactatatctttg
aagggtgcttgtcgtctttcagatgttgggctaagcgctcttgtttcttctgcaccttct
ttgagatccattaatcttagtcagtgctctcttctttcttctaatggtatcaagtgtttg
tctgactcattggggtcaattctgaaggagctgtatttagatgactgcgaagcaatagac
tgttcgctggttttgccatttttgttaaaacttgaacatttggaagttttatcagtagct
ggtatccccaaagtttgtgacgattttgttatagagtttgttactcagcgtggtcataat
atgagggagcttgttttgaaggactgcaagaagttgactgaccgttctgtgaaagctgtt
gccgaatcttgtcccagattatgtgcaatagatctcagtaacttgtttggattgacagac
tattccgtaggttatcttgctaatggttgtagagcgattcacaagctaaagctctgccgg
aatgcattcagtgatgaagctattgctgcatatctcgaaactagtggaaagtggttgaaa
gaactgtccctcaataacataaaaaaggtgtcacacaacactgcaatgtcactcgcagag
cattgtagaaatttggtgagtttagacgtgtcttggtgtcgcaacctgacagatgaagcc
ctggggttgatcgcagatagctgcttatccctagaagttctgaaggtgtttggctgtact
cagattacggaagtgttcttggatggccactcgaacccacaagttaaaatcatcggaagg
aagttgaccccagtgatggagcatctaagtttggctgatcctctgcaacaaggtccacta
ctttattcatctgcatag
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