Ipomoea triloba (trilobed morning glory): 116011676
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Entry
116011676 CDS
T07384
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
itr03032
]
116011676
03029 Mitochondrial biogenesis [BR:
itr03029
]
116011676
Enzymes [BR:
itr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
116011676
DNA replication proteins [BR:
itr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116011676
Mitochondrial biogenesis [BR:
itr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
116011676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
AAA_22
UvrD_C_2
Pif1_2B_dom
DEAD
Herpes_Helicase
AAA_16
SLFN-g3_helicase
Viral_helicase1
NPHP3_N
PhoH
ATPase_2
AAA_7
nSTAND3
NACHT
AAA_5
ATPase
AAA
NB-ARC
TsaE
UvrD-helicase
NTPase_1
Pap_E4
AAA_14
AAA_25
RNA_helicase
ResIII
ABC_tran
TrwB_AAD_bind
nSTAND_NTPase5
ATP-synt_ab
mIF3
AAA_11
P-loop_TraG
Sigma54_activat
AAA_18
BrxC_BrxD
cobW
nSTAND6
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
116011676
NCBI-ProteinID:
XP_031106943
LinkDB
All DBs
Position
1:27382049..27384112
Genome browser
AA seq
547 aa
AA seq
DB search
MNLIFSSAIATYRCFSSKAAAGKNRHLAQRAMSSKKDSSSNESSSSKPPNKRTRVKWTVQ
QSQVLDAISAGKSVFVTGSAGTGKTFLIQHIIRKLRRIHGRSRVYVTASTGVSACALNGY
TLHSFAGIGLGEATAEELLHKVCSNQRACHRWKMVQALIIDEISLISGELYDKLEFIARK
IRSSINGSDEEMVWGGIQVVASGDFFQLPPIFNKKTQKFAFEASIWNLSFDTQIDLTTVF
RQSDPQLVKLLQGIRKGEYDFEDLNLLKNHCSKLEPDPLAVKLYPRNDDVYIVNKKHLDS
LHQDLIGYRAVDSGEDSWKQQLKLGIAPDFLELCVGARVMLTKNLDARHKLVNGAAGTVI
GFESVNGTDKTFGTNWLPIVKFDFQPEKLIIGPETWSIMDGEEVVAVRKQIPLILAWALS
IHKCQGMTLDCLYTDLNRAFGYGMVYVALSRVKSLEGLHLSSFNPNMIKVHPKGTNPTEF
ILAWALSIHKCQGMTLNCLYTDLNRAFGYGMVYVALSRAKRLEGLHLPSFNPNMIKGTNP
TELVTTG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgatattctcctctgcaatagcgacgtatagatgtttcagctctaaggcagca
gctgggaaaaacagacatttggctcaaagggccatgagcagcaagaaggattcttctagc
aatgaatcttcatcttctaagccgcctaataagaggactagagtaaaatggactgtgcaa
cagtcacaagttttggatgccatttctgctgggaagtcagtttttgttactgggtcagca
ggaactggtaaaacctttctgatccagcatatcatccggaagctccgaagaattcatggg
cgatctcgggtttatgtcactgcttctactggtgtttcagcttgcgccctgaacgggtac
acccttcattcttttgctggcattgggctgggtgaggctacagctgaagaattactacac
aaggtttgttccaatcagagggcgtgccacagatggaaaatggtccaggctttgattatt
gatgaaattagcttgataagtggagaattgtatgataaacttgagttcattgcgcgcaag
atacgaagtagtataaatggatctgatgaggagatggtttggggtggtattcaagtagtt
gcgagtggagatttctttcaattaccacctatctttaataagaagacacagaaatttgct
tttgaagcttctatatggaatctgagctttgacactcagattgatcttactacagttttt
aggcaatcagatcctcagcttgtaaaacttttacagggaataaggaaaggggaatatgat
ttcgaggacttaaatctattgaaaaatcattgctcaaaattggagcctgatcctttagct
gtaaagctctatccaaggaatgatgatgtatatatagtaaacaaaaaacacctagatagc
ttacatcaggatcttattggttatcgagctgttgacagtggtgaggacagttggaaacaa
cagctaaagctgggaatagcacctgattttcttgaactctgtgtaggcgcaagggtgatg
ttgacaaagaacttggatgctcggcacaaacttgtgaatggtgctgctggtactgttatt
ggttttgaatcggttaatggtactgataaaacatttggcactaactggttacctatagtg
aaatttgactttcaaccagaaaaacttattattggtccagaaacatggtctataatggat
ggtgaggaagttgttgccgtaagaaaacagattcccctcatactagcatgggctctaagc
atccacaaatgtcaagggatgactctagactgcctttatacagatctcaaccgagctttc
ggctatgggatggtttatgtggcactttcacgtgtgaaaagcttggaaggtcttcatttg
tcaagtttcaatcctaatatgataaaggtgcacccgaaaggcaccaacccaactgaattt
atactagcatgggctctaagcatccacaaatgtcaagggatgactctaaactgcctttat
acagatctcaaccgagcttttggctatgggatggtttatgtggcactttcacgtgcgaaa
aggttggaaggtcttcatttgccaagtttcaatcctaatatgataaagggcaccaaccca
actgaattggtgactacaggatga
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