Ipomoea triloba (trilobed morning glory): 116012078
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Entry
116012078 CDS
T07384
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1
KO
K14848
ribosome assembly protein RRB1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
116012078
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116012078
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_EIPR1
WD40_Prp19
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
NBCH_WD40
WD40_RFWD3
MIOS_WD40
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
116012078
NCBI-ProteinID:
XP_031107406
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Position
3:16944349..16947924
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AA seq
475 aa
AA seq
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MVRSLKNPKKVKRKNKGGNKGEGSSSSNLIPSPPAKVWQPGVDKLEEGEELQCDPSAYNS
LHAFHIGWPCLSFDILRDSLGLVRTEFPHSVYCVAGTQAEKSSWNSIGVFKITNISGKRR
ELVPKTNNDEDTDMESDSSDSDDEEDEVGGSGAPVLQIRKVFHEGCVNRIRTMTQNPHIC
ASWSGGGHVQIWDFSSHLNALAESQGDVSHGASAVSNQSPLVKFGGHKDEGYAIDWSPLV
PGRLVSGDCKNAIHLWEPASETTWNVDSKPFVGHIASVEDLQWSPTEPSVFASCSVDKNI
AIWDIRIGKSPAASIKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLLKEGDAVVA
HFEYHKHPITSIEWSPHEASTLAVTSSDNQLTIWDLSLERDEEEEAEFKAKTKEQVNAPT
DLPPQLLFVHQGQKDLKELHWNSQIPGMIISTAADGFNILMPSNMENMLPPANEA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaagcctcaaaaaccctaaaaaagttaaacgcaagaacaagggtgggaacaaa
ggagaaggatcatcgtcatcgaatttgataccttcaccgccggcgaaggtgtggcaacct
ggagtagacaagttagaggaaggagaagagcttcagtgcgatccttctgcatacaactca
ctccatgccttccacattggctggccttgcttaagctttgatattctacgcgactctcta
gggttggtgcggacagaatttccacattctgtgtattgtgtggcagggacacaggctgag
aaaagctcctggaattctattggagtatttaagataactaatatatctggaaagaggcgt
gagttagtaccaaagacaaacaatgatgaagatactgatatggaaagcgatagtagtgat
agtgatgatgaagaagatgaagttggtggatctggagcacctgttttacagattcgtaag
gtgtttcatgaagggtgtgttaaccgcatacgtaccatgacccagaacccacatatatgt
gcttcatggtcaggtggtgggcatgttcagatttgggatttcagctcccatttaaatgct
ttagcagaatcacaaggtgatgttagccatggggcttcggcagtttctaatcaatcacct
ctagtcaaatttggtggacataaggacgaagggtatgctatcgactggagtcctcttgtt
cctggaaggcttgtatcaggggattgcaagaatgctattcatctatgggagccagcatcg
gagacaacttggaatgttgattctaaaccttttgttggacacattgcaagtgttgaagac
ctacagtggagccccacagaaccttctgtatttgcatcttgctctgtggataaaaatatt
gcaatatgggatatacgcattggaaaatctcctgcagcatcaataaaagcacacaatgct
gatgtgaatgttatatcctggaacaggttggcaagttgtatgctggcatctggaagtgat
gatggcacattttcaattcgagatcttagattactcaaggaaggagatgctgtagttgcc
cactttgagtaccataaacaccccataacatctattgaatggagtccacatgaagcatca
acactggcagttacgtcatcagacaatcaactcacaatatgggacctttctttagaaaga
gatgaggaagaggaagcagagttcaaagcaaaaaccaaggagcaagtgaatgcccctact
gatttgccaccacaactcctctttgttcatcagggtcagaaagacttgaaggaacttcac
tggaattcccagattccaggaatgattatatccactgctgcagatggtttcaacatccta
atgccatcaaacatggaaaacatgcttcctcctgctaatgaagcttaa
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