Ipomoea triloba (trilobed morning glory): 116012205
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Entry
116012205 CDS
T07384
Name
(RefSeq) autophagy-related protein 18b isoform X1
KO
K17908
autophagy-related protein 18
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
116012205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116012205
03029 Mitochondrial biogenesis [BR:
itr03029
]
116012205
Membrane trafficking [BR:
itr04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
116012205
Mitochondrial biogenesis [BR:
itr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116012205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_Vps41
WD40
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
116012205
NCBI-ProteinID:
XP_031107551
LinkDB
All DBs
Position
3:29309802..29318822
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AA seq
382 aa
AA seq
DB search
MASQSSSCPILCASFNQDNSCFTIGTKEGFKIFDSNTGKLLYERAAGAFIIVEMLYRSSL
LAIVGAGEQPSLSPRRLCLFNTMTGVALQELKFLTSILAVRMNKQRLIVILQEKTFIYDI
NSLKILDTIDTVPNSRGHCAFSPCLDGSFLALPASTTKGSVLVYNVMDLHLHCEIDAHRS
PLTSMALSSRGMYIATASEQGTIVRVHLVSDATKSYSFRRGTCPSIIYSLSFAPMTGLPD
IVLATSSSGSAHIFSLSNTLNQRTKRSSGLFASVIPDSVCDALDPAHHHVLHNAVSAGVK
SNTLIRKTDKVSEPSTSGTVALRATISVITLAGYFMEYGYSVNYQNESSWALEREFNLLT
ITADKGGNTRDGARKFRLERPM
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcagtcatcttcatgcccgatactctgcgcttccttcaatcaagataacagt
tgctttacaattggaacgaaggaaggttttaaaatcttcgattctaatacagggaaactc
ctttatgaaagagctgctggagcattcatcatagttgagatgctatacaggtcaagtctt
cttgcaattgttggggctggtgaacagccatccttatctcctaggagactatgcttgttt
aatacaatgactggagttgctctccaggagctgaaattcttaacttcaattcttgctgtt
cgcatgaataagcaaagattgattgtcatattgcaagagaagactttcatatatgacatt
aacagtctaaagatattggatactattgatactgttccaaattcaagaggacactgtgca
ttttccccatgtttggatggttcatttttggctcttccagcaagtacaacaaaaggttca
gtgttagtatacaacgtgatggacctccacttgcactgtgagatagatgcacatcgctca
ccattaacttccatggctctatcttcaaggggaatgtacattgcaactgcatctgagcaa
gggaccattgtcagagttcatcttgtttcagatgctaccaagtcatacagtttcaggagg
gggacatgcccatcaattatctattctctgtcatttgcaccaatgactggacttcctgat
attgttctggccacaagctcttcaggttctgctcacattttctctctgagcaacaccttg
aatcaaagaaccaaaagatcaagtggcctttttgcatcagtaatacctgattctgtttgt
gatgcattagatcctgctcatcaccatgtgcttcataatgctgtttcagctggagtcaaa
agtaacacactgatccgcaagacagacaaagttagtgaaccctcaacgtctggaactgtg
gcattaagagcaactatatcagtaataacattagcaggatattttatggaatatgggtac
agtgtcaactatcagaatgagtcctcctgggcgttggagcgggaatttaatcttttaaca
atcactgcagataaaggaggtaacaccagggacggagccagaaaattccggttggagagg
ccaatgtag
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integrated database retrieval system
