Ipomoea triloba (trilobed morning glory): 116012220
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Entry
116012220 CDS
T07384
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116012220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
itr03400
]
116012220
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
116012220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
116012220
NCBI-ProteinID:
XP_031107573
LinkDB
All DBs
Position
3:17841759..17848744
Genome browser
AA seq
1102 aa
AA seq
DB search
MKRQSSILSFLKKPSPEDQRSGGATLNGNQPTHLQHNKNAPPPTKCAVLPATLDLTEEPK
GTDTPPEKVPRQIFPTNDDGSGTKPSVFDSIKHKFVKFHNGEKFADRNLTSGGTLMMSSV
TGGSERSEVHGDASLGSKLLAKENAVGFNRTIKQGNNGCSSVIVINDDAPGPETPGTRPL
VPRLKRVQEDAQGLQDKGDCSALNMNKRVKTLQDSITVRKNLEEVSEMTSKFEWLHPSRI
KDANGRRPGDPSFDKNTLYIPPDALRKMSASQKQYWGVKCRYMDVVLFFKVGKFYELYEL
DADIGHKELDWKITMSGVGKCRQVGISESGIDDAVQKLLARGYKVGRIEQLETSEQAKSR
GSTSVIQRKLVNVLTPATSSEGNIGPDAVHLLSIKERCLDMEKGSTAFGFAFVDCAALKF
WVGSISDDASCAALGSLLMQISAKEVIYDSRGLSKEAQKALKKYSLTGTAAPQLTPIQQD
ADFVDSLEVKNFIQLKGYFKGSLNGWDHVFDGVMHQDLAFCAFGALASHLTRLMLDDVLR
NGDILTYEVYRGFLRMDGQTLVNLEIFSNSADGGPSGTLYKYLDNCITSSGKRLLRSWIC
HPLKDVDTVNLRLNVVEELMTHSETMSFVAQYFRKLPDLERLLGRVKASNQSSAELLLPT
IGKKLLKQRVKVFGSLVKGLRIGMDLLMLLQKEEQLSSSLSKVFRLPVLHGNDGLHKFLT
QFEAAIDSDFPNYQDHDITESNAETLSILMELFIEKATEWSQVIYAIGCVDVLRSFAVTA
TFSTGAMCRPIILPLSESTNLSYENKGPVLEMKGLWHPYALGESEGLPVPNDLQLGGETD
YYNRRTLLLTGPNMGGKSTLLRATCLAVVMAQMGCYVPCEAFTLSLVDIIFTRLGATDRI
MTGESTFFIECRETASVLQNATQNSLVLLDELGRGTSTFDGYAIAYAVFRHLVEIVNCRL
LFATHYHALTKEFGSHPHVILKHMACSFKSNQKLVFLYRLASGACPESYGMQVALMAGIP
KQVVESASKAGKVMKTKIGESFRSSEQRSSFSTLHEEWLKSLVLISKSGESELDEDTFDT
LFCMWHELRSSDGFLNSAASHQ
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcaatcatctatactctcgtttttgaaaaaaccctcgccggaggaccaacgt
tccggcggtgccacattaaacggcaatcaacctactcatcttcagcacaataaaaatgct
cctccgcctactaaatgtgccgtgcttccggccaccttggatttgactgaagaacctaaa
ggcaccgatactcctcctgaaaaggtaccgcgtcagattttcccgaccaacgacgatggc
agcggaactaagccttcagttttcgatagcattaagcacaagttcgtgaagtttcataac
ggagaaaaatttgcggataggaacctgacaagtggtggtactttaatgatgtcctctgtt
actggtggaagtgaaagatcagaggtacatggtgatgcttctttgggttctaaactctta
gcaaaggaaaatgctgtgggtttcaatagaactatcaaacaaggaaacaatggatgctcc
tctgttattgtgatcaatgatgatgctcctggaccagaaacaccaggcacacgccctttg
gttcctcggttaaagcgagttcaagaggatgctcaaggtcttcaggataagggtgactgt
tctgccttgaatatgaacaagagagttaaaaccctgcaggattctattactgttaggaag
aaccttgaagaggtgtctgaaatgactagtaagtttgaatggctacatccttctcgaatc
aaggatgcgaatggtagaagaccaggtgatccttcttttgacaagaacacactgtatatt
ccgcctgatgctttgagaaaaatgtcagcatctcagaaacagtattggggtgtcaaatgc
cgatatatggatgtggtgcttttctttaaagtggggaagttttatgagctttatgaacta
gatgctgatattggccacaaggagcttgattggaagataaccatgagtggcgtgggaaaa
tgtagacaggttggcatatcagaaagtgggattgatgatgctgttcagaagttgctagct
cgagggtataaagtggggcggattgaacaactagagacttcagagcaagctaaatccagg
ggttctacttctgttattcaaaggaaacttgttaatgtacttacacctgccacttcaagt
gagggtaatattgggcctgatgcggttcatcttctttccataaaggagaggtgcttggat
atggagaagggttccactgcatttgggtttgcttttgttgattgtgctgctttaaaattt
tgggttggttcaatcagtgatgatgcatcctgtgcagctttggggtctttgttgatgcag
atatctgctaaggaagttatatatgactcacgaggactgtcaaaagaagctcagaaagct
ttgaagaaatactcgttaacaggaactgctgccccgcaattgacccccattcagcaagat
gcagattttgttgattctttagaagtgaaaaatttcattcagttgaagggatactttaaa
ggatcacttaatgggtgggatcatgtctttgatggagtaatgcatcaagatcttgcattt
tgtgcttttggtgcacttgccagtcatttaacgcggctaatgttagatgatgttttacgt
aatggcgacatccttacatatgaagtctatcgaggtttccttagaatggatggacagaca
ctagtcaatcttgaaattttcagcaatagtgctgatggtggtccatcagggactctgtac
aagtatcttgacaattgcataacatcatccggtaagaggcttctaaggagctggatctgt
catccattaaaagacgtcgatactgttaacctcagacttaatgtggttgaggaacttatg
actcattcagaaacaatgtcatttgttgctcaatactttcgtaagcttcctgatttggaa
aggctgcttggacgtgttaaagctagtaatcagtcttctgcagaacttctgctgcccaca
attgggaaaaaattattgaaacagcgagttaaagtgtttggatcacttgttaaagggctg
aggattggcatggatttgttgatgttattgcagaaggaagagcagctgagctcttcatta
tccaaagtcttcagactgccagttttacatggtaatgatgggttgcataaattccttacc
caatttgaagcggcaattgacagtgacttcccaaattaccaggatcatgatataactgag
tccaatgctgaaaccctatcaattctgatggagttatttattgagaaggctactgaatgg
tcgcaagtgatttatgccattggttgtgttgatgtgttaaggtcttttgccgttactgcg
acattttctactggagctatgtgtaggccaataatcttacctctttcagagtcaacaaat
ctttcctacgagaataagggaccagtgctggaaatgaaaggattgtggcacccctatgcc
ctcggtgaaagtgaggggctgccagttcctaatgatctccagcttggtggggagacagat
tactacaatcgtcgtactttactgttaactggaccaaatatgggtggaaagtctactctt
ttacgtgccacttgtctggctgttgtgatggcccagatgggctgctatgtgccttgcgag
gcatttactctctcacttgtggacatcatcttcactcgtcttggtgccactgaccgaatc
atgactggtgaaagcacattctttatagagtgtagggagactgcatcagtgttgcaaaat
gccactcagaattctcttgttctccttgatgaattgggcagagggacaagcacatttgat
ggatatgctattgcatatgctgtattccgtcatcttgtggaaattgtgaactgccgccta
ttgtttgctacacactatcatgctctgacgaaggagtttggatcccatcctcatgtcatc
ttgaagcacatggcctgctcattcaaatcgaatcagaagcttgttttcctataccggctg
gcctctggagcctgcccggagagctatggaatgcaagtagcactgatggccgggatccca
aaacaagtggttgaatctgcatccaaggctggtaaagtaatgaagacaaagattggagaa
agttttagatcaagcgaacagagatcaagcttctcaacacttcatgaagagtggttgaag
tctctggtactcatctccaagtcaggagagagcgagcttgatgaggacacatttgatacg
ttgttttgcatgtggcatgagctaagaagctcagatggattcctcaactcagccgcatcg
catcagtag
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integrated database retrieval system
