Ipomoea triloba (trilobed morning glory): 116012300
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Entry
116012300 CDS
T07384
Name
(RefSeq) probable polygalacturonase At1g80170 isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Module
itr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116012300
Enzymes [BR:
itr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
116012300
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
ATP1G1_PLM_MAT8
Motif
Other DBs
NCBI-GeneID:
116012300
NCBI-ProteinID:
XP_031107674
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Position
3:complement(18817872..18821065)
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AA seq
403 aa
AA seq
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MDIFAFLFILGLISSLSSRVSCKSFNVVDYGAKGDGMTDDSQAFLNAWKDACSSNTHRSP
QVIIPAGSTFLVKPVQFNGPCMSKHTVFLVSGTVVAPGSPPDWNGLDTSQWLSFNGVNGL
IVDGGGIIDGQGKKWWDQSCRDHPNMEGCTCLAPSAMKFMYCNNTTLNNIHFVNSPQTHM
QLFVCSGFNINNLTVQSPGDSPNTDGIHIHASEHVVITYSKISCGDDCISIGDFTHDVEI
NNVQCGPGHGISVGSLGKSGNYVEVKDIHVSKSTFYGTTNGARIKTWQTGKGYARNITFE
DLQIFSVYNPIIIDQNYCSVPGTCMEQDTGVQISDVVFQRINGTATSEAAISLNCSKAVP
CLGIKLDSIDITPQTPSVPVAACCSNAHGEETSVEPGPCLKQD
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggatatttttgcttttttgttcattcttggcttgatatcatcattatcatcaagagtt
tcctgcaaaagctttaatgtggtagactatggagccaaaggggatggaatgacagatgat
tcccaagcttttctgaatgcatggaaggatgcatgttcttcgaatacgcataggtctcct
caagtgatcattcctgcaggctcaacatttctggttaaaccagttcaatttaatggcccc
tgcatgtctaaacatactgttttcctggtgtcaggtacggttgttgcaccgggctcacca
ccggattggaatgggctcgacacaagtcagtggctaagtttcaatggtgtaaatgggctg
attgttgatggtggagggataattgatggacaagggaagaaatggtgggatcaatcatgt
agagatcatcccaatatggaaggatgcacatgcttggctccatctgcaatgaagttcatg
tactgcaataacaccactctcaacaacatccattttgtcaatagccctcaaacgcatatg
caactttttgtatgcagtggcttcaacattaacaatttgactgttcaatctcctggagat
agtccaaataccgatggcattcacatccatgcttctgagcatgtggtcatcacctattct
aaaataagttgcggagatgattgcatttccattggagacttcactcatgatgttgaaata
aataatgtccaatgtggtccaggccatggtataagtgttggaagcttaggaaagagtggc
aattatgttgaagtgaaagacattcatgtcagcaaatctaccttttatgggacaacaaat
ggagctcggatcaagacatggcagactggcaaaggatatgcacggaacataacgtttgaa
gatctacaaatcttttcggtatataaccccatcatcatagaccaaaactattgctccgtt
cctgggacatgcatggaacaggacactggggttcaaatcagtgatgtagttttccaaaga
ataaatgggacagcaacttcagaggcagccataagcctcaactgcagtaaggcagtgccg
tgcttaggaataaaactggattccatagacataacgccacagacaccctcggtgccagtt
gcagcttgttgtagcaatgcacatggcgaggaaactagcgtggagcccgggccttgtcta
aaacaagactga
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