Ipomoea triloba (trilobed morning glory): 116012618
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Entry
116012618 CDS
T07384
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Module
itr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116012618
Enzymes [BR:
itr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
116012618
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pectate_lyase_4
NosD
Motif
Other DBs
NCBI-GeneID:
116012618
NCBI-ProteinID:
XP_031108075
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Position
1:32566608..32568422
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AA seq
396 aa
AA seq
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MRAFMFLFTFFAFMLVSPSLAVNVVGYGARGDGRTDSTAAFHRAWAAACRSARPAVVYVP
RGLFLIRPVAFNGPCRSRITFRIDGTLVAPRNIYAIGNSEFWILFYKVSGLSLQGGTIDA
RGNGFWNCRTRGQNCPRGSRSLTIMHSNNVVVSGLRSFNSQTIHIAVGHSRDVKLQNVRI
RAPSGSPNTDGIHVQSSMGVTITDSVIKTGDDCISIGPGAMNLWIQRIGCGPGHGISIGS
LGNSHNEEGVENVTVTNVVFSRTQNGVRVKSWGRPSGGYARNLHFRNIVMRYVANPIIID
QQYCPNGGCARQSSGVKVSEVTYKNIKGTSSTQAAMKFECSAANPCSGIRLHNIRLSFVD
RLRRPTLAYCRNAKGSHSGVVTPKTCFSFHKTKLNM
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgtttatgtttttgttcaccttcttcgcgtttatgctagtgtctcctagcttg
gccgtgaatgtggttggctacggtgctagaggagatggtagaacggactccacggcggcg
ttccaccgcgcttgggcggccgcatgtcgttccgctaggccggcggtggtttacgtgccg
cgggggttgttcttgattcggcccgttgcttttaacgggccttgccggagtagaatcacc
ttccgaatcgacggcaccctcgtcgctccccgcaacatttacgccattggcaattccgaa
ttctggattttgttttataaggtcagtgggctctcactccagggtggaaccattgacgct
aggggcaatggtttctggaattgtcgcactagaggccaaaactgtccacgtggatcaagg
tcattgacaataatgcactcgaacaacgttgttgttagcggtttaagatcatttaacagt
cagacgattcacatagcagttggacatagcagggacgtgaagttacagaatgtgagaata
agagctccaagtggaagtcccaacacagatggtatacacgtacagagctccatgggcgtt
acaatcacagacagtgtaataaagactggagatgactgcatctcaataggcccaggcgcc
atgaatttgtggatacaaaggattggttgcggcccgggacacggcatcagtatcgggagt
ctgggcaacagtcacaatgaagaaggagtggagaatgtgacagtgacaaacgtggtcttc
agcagaactcaaaatggggttagggtaaagtcatggggaaggccaagcggagggtacgcc
agaaatctccattttagaaacatagtgatgagatatgttgcaaaccccatcattatagac
cagcaatactgccccaatggcggctgtgcacgacagagttctggggtgaaagttagtgaa
gtgacatacaagaacataaaagggacgtcgtcgacgcaggcggccatgaagtttgaatgc
agtgcggcaaatccatgcagtggaatcagactgcataacataaggctgagtttcgtggat
cggttgcgcaggccaactttggcttattgtagaaatgcaaagggaagtcatagtggcgta
gtcactcccaaaacttgcttttcatttcacaaaaccaaattaaatatgtaa
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