Ipomoea triloba (trilobed morning glory): 116012619
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Entry
116012619 CDS
T07384
Name
(RefSeq) RING finger and transmembrane domain-containing protein 2-like
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116012619
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116012619
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116012619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-rbx1
Prok-RING_4
zf-RING_6
zf-C3HC4_4
zf-RING_16
zf-ANAPC11
zinc_ribbon_16
Caps_synth_CapC
zf-RING_10
zf-Nse
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
116012619
NCBI-ProteinID:
XP_031108072
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All DBs
Position
3:complement(14204510..14209194)
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AA seq
427 aa
AA seq
DB search
METTNGSGSDLASSPSSPSSITVWPPFRFFRFPVSTLLEYSGVLRVQPDSSESMALVPNA
TETSDAGTSGSGEVTIRIIGTAEQDRVGIEDDVAGGGEAGVEERGVGGEEAARMAVDSGA
GESDSGTSRDSSYQRYDIQQIARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWVTAFMFKS
NDILRKQTALKGERKMSVLIGYFLAFMLHVIVIYWWYRKDDLFFPLFMVPPKAIPPFWHA
VFIILVNDTMVRQAAMALKLVLLMHYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVW
YRFFLNKDYGSLFSSLTTGLYLTFKLTTIVEKVQSCFTALKALSRKELHYGSYATTEQVN
AAGDLCAICQEKMHAPILLSCKHIFCEDCVSEWFERERTCPLCRALVRPADLRSFGDGST
SLFFQLF
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaacgaatgggtctgggtcggatttagcttcttcgccttcgtctccgagcagt
attactgtgtggcctccattccggttctttcggttcccggtttccaccttgttagagtac
tctggggttctccgggttcagcccgacagctctgagagcatggctctggtaccgaatgct
actgagacctcggatgcagggactagtgggagtggggaggttacgattaggataattgga
acagctgagcaggatcgggtggggattgaggatgacgtggcgggtggaggtgaggctggg
gtggaggagaggggtgtgggcggtgaggaggcagctagaatggcggtggattccggcgcc
ggggaaagtgacagtgggactagtagggattcttcgtaccagagatatgatatacagcag
attgctaggtggattgagcaagttctcccattttcattgctcctcttggtggtttttatc
cgccagcatttgcaaggtttttttgttacaatttgggtcactgctttcatgttcaagtca
aatgacattcttcggaagcaaacagctctaaagggagagagaaagatgtctgtccttatt
ggctattttctggccttcatgcttcatgttattgtaatctactggtggtatcggaaggat
gatcttttctttccattattcatggttcctccaaaagctatcccacccttctggcatgca
gtgttcatcatcctggtaaatgacactatggtgagacaggcagcaatggctttgaagctg
gtgctgctaatgcattacaagaatggaaggggtcataatttccggagacagggtcaaata
ttaactctggttgagtatacccttttgctataccgtgcattgttgcccactccagtctgg
tatagattctttctgaataaagattatggaagccttttttcatcactgacaacagggttg
tacttaacattcaagctcactacaatagttgagaaggtccagtcctgcttcactgctctg
aaggcactatcaaggaaagaactccactatgggtcttatgctacaactgaacaagtaaat
gcagctggcgatctatgtgctatttgccaggagaagatgcatgcacccattctattgagc
tgtaaacacatcttctgtgaagattgtgtgtcagaatggtttgaacgagaaagaacttgc
cccctgtgcagagccttggttagacccgctgatctacgatcctttggtgatggatccacg
agccttttcttccaattattctga
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