Ipomoea triloba (trilobed morning glory): 116012623
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Entry
116012623 CDS
T07384
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
itr03036
]
116012623
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
itr04812
]
116012623
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
116012623
Microtubules and associated factors
gamma-tubulin ring complex
116012623
Cytoskeleton proteins [BR:
itr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
116012623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_DCAF4
PsbK
Motif
Other DBs
NCBI-GeneID:
116012623
NCBI-ProteinID:
XP_031108078
LinkDB
All DBs
Position
3:15121597..15126891
Genome browser
AA seq
786 aa
AA seq
DB search
MNSTDSIKPLLAAAAGDTVKLFDLSLEPRDTCILTYTPSPGSQVNSVKWSHTNLVVASAG
DDKKISLWRKNGQTLGTIPAAGSDSGDSIEESISTINFNNKGSRYLCSGGSGQVVRIWDL
QRKRCIKWLKGHSDTITGAMYNCKDEHLASISFNGDLILHNLASGARAAELKDPNEQVLR
VLDYSRISRHLLVTAGDDGSIHLWDTTGRSPKVSWLKQHSAPTTGISFSPSNDKIIASVG
LDKKLYTFDSGSRRPAFCIPYEAPFSSLAFTDDGLTLAAGTSSGRVVFYDIRGKPQPLTV
QRAFGNSEAVTSLCWQRSKPIIVNENNCTAETALLGTAVEDSILMPDPLPAVTSSSLSTS
TTVSGSRNTGRTGPSVDSLSFLSGGSGSTSGTRFTSEETPIRNELWKGGALGRLNAPRYN
FKDDMEVFSPLVDVQPITPSLDKLWDDHDASKKDHEKKSSFLLPSRRFPLLDEGASENLS
VFDWKSSTVSKQDDIRSSLSQMASTPSASSRSDDSSSITPPEAWGGERFSDRLAHLRQSR
FAMSTSSSLASGTMFSGLQDTFPASHSMSSLTSSSLSLENLRVRETSNEETSLGSSDHVP
LSSTSLSLGTKGLTGQGSLDSLGTALALPRKFSSYAERISTTSSFSDGTLSVGSPKTKKT
GAETREELLNSLLSRSDTASPKATGAFQSMNGDVKQPMKNSSQPDSQQGSSFTLQLYQRT
LEETLASFQKSIHEDMRNLHIEILRQFHMQEVETSSVMKSILENQAELMREIQLLRKETQ
QLRQLL
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaattccacggattcgataaagccattgttggccgccgccgccggcgacaccgtgaag
ctcttcgacctctcgttggagcctcgcgacacttgcattctcacctacacgccgtctccg
ggctcgcaagttaactccgtcaagtggagccacaccaatttggtggtggctagtgccgga
gacgacaagaagatttccttgtggagaaagaatgggcagacgctggggactattccggca
gcaggcagcgatagtggtgatagtatcgaggaatccatttctaccatcaactttaacaac
aaaggatcaagatatctttgttctggaggaagtggtcaagttgttagaatatgggatttg
cagcggaaacgatgcattaaatggttgaaaggtcatagtgatacaataactggtgcaatg
tacaattgcaaagatgagcacctagcttctatcagctttaatggggatcttatacttcac
aaccttgcttctggtgctagagctgctgaactcaaggatcctaatgagcaggttctgaga
gtgctcgattattctaggattagcagacacttgttggttacagctggtgacgatggatct
atccacctttgggatacaaccggtcgaagcccaaaggtttcttggttaaagcagcattct
gccccaactactggcattagtttttcaccatccaatgacaagattattgctagcgttggt
ttggataagaagctgtacacttttgactcaggatctagacggccagcattttgcattcct
tatgaagcaccattttcttcacttgcatttacagatgatggattaacactggcagctggg
acgagtagtgggcgggttgtattttatgatattcgtgggaaaccacaacctttgactgtt
caacgtgcttttggaaattctgaggctgtcaccagtctatgctggcaaagatcaaagcct
atcattgtaaatgaaaacaactgcaccgcagagacagctcttttgggcaccgctgtggag
gattcaattttaatgcctgatccgcttcctgctgtgacatcatcaagcctttcaacgtcc
acgacagtatcaggttcacgaaatactggtcgtacaggtccttctgtggactcattatct
tttttatcagggggtagtggatccacatcaggaacacgatttacatcagaggaaacacca
attagaaatgaattgtggaaaggtggagctttgggaagattaaatgcacctcgttataac
ttcaaggatgatatggaagtgttttccccacttgttgatgttcaaccgattacaccctca
cttgataagttgtgggatgatcatgacgcttcaaagaaggaccatgagaagaaatcatcg
tttttattaccttctagaaggttccctcttctagatgaaggtgctagtgaaaacctgtca
gtatttgattggaaatctagtacagtatccaagcaggatgacatccgctcttctctttca
caaatggcttctactcctagtgcatcttcccgcagtgatgactcttcatccataactcct
ccagaagcttggggtggtgagagattttctgataggttagctcacctccgtcaatcccgg
tttgcaatgtctacttccagtagccttgcatcaggaacaatgttctctggattgcaagat
acttttccagcaagtcacagcatgagctctctaaccagttccagcctgagcttggaaaat
ttgcgtgtcagagaaacttcaaacgaagaaacttcattgggatcctcagatcatgttccc
ttaagttccacatctctttcccttggcacaaaaggcttaactggacagggtagtctggac
tctcttggtactgcattagccctccctcgaaaattttccagttatgctgagagaataagc
actacatcatccttcagtgatggaactttgtcagttggttcacccaaaactaagaaaact
ggggctgaaactagggaagagcttttaaatagcttgttgtcaaggtctgatactgcatca
cccaaagcaactggtgctttccagtcaatgaatggagatgtcaagcaacctatgaaaaac
agttctcagcctgactcacagcagggaagttcatttacacttcaattgtatcaacgtact
cttgaagaaacacttgcatcatttcagaaatccattcatgaagatatgaggaatcttcac
attgaaattttaagacaatttcatatgcaggaggtggaaacgtctagcgtcatgaagtcg
atcctggaaaatcaggccgagcttatgagagaaattcaattacttaggaaagaaacacaa
caactccgccaattattatga
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