Ipomoea triloba (trilobed morning glory): 116012695
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Entry
116012695 CDS
T07384
Name
(RefSeq) protein RDM16
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116012695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
116012695
Spliceosome [BR:
itr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116012695
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
116012695
NCBI-ProteinID:
XP_031108197
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Position
3:15729179..15733993
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AA seq
881 aa
AA seq
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MEKEKSSRKDRESAKEREHKHRSSKDKSRDAASDEDDNRHHHRHRSKHRGGDDDDDRRRS
DNRHRRHSEEDSFDRERSTERHRSEREGSLDRREKSHDRDKRERSHERETKREESVERRH
FSKRKERGDSEDRNDGAEKRARVSEGKNENGKEKEDRRERRRFDDGEVKEERRERKRFED
KVKQDDMGVDEERMEREFQNRTFKKEEPVEDAQHVDSVANGLAMESSNKAPRTLPETSLA
PVDPPATKVSSISTNENKGVNINRSHEVPGKSSTDGTASGAGKRAGFSLDALAKAKRALQ
MQKELAEKLKKIPTLNKGAGPTREGSQQVGATESHKASSSSAGVQPALVASSNSGILPTP
ASAAPSTLDLPAGASVNLPPSGLPHLAGLTAQKYEAVKRAQELAAKMGFRQDPEFAPLIN
MFPGQMPQEVTIQPKPAKAPVLRLDALGREIDEQGNVVNMPKPSSTLKVNINKKKKDAFQ
ILKPELEVDPDENPHFDARMGLNKNKILRPKRMSFQFVEEGKWSRDAEIIKLKSQFGEAR
AKELKAKQAQLAKAKAEPDINPNLIEVSQRVFTQEKQKEPIPEVEWWDVPILQSGAYGDI
TDGNISHDKLRMEMITIYVQHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAREKD
KQEMIRQGLLEPPKPKVKMSNLMKVLGSEATQDPTKLEMEIRSAAAEREQAHIDRNIARK
LTPDERREKKERKLFDDPNTTLETIVSVYKINDLSHPQTRFKVDVNAQENRMTGCAVISD
GISVVAVEGGKKAIKRYGKLMLRRIDWAAAVKQEEDEDEDEDEEKPINKCVLVWQGSVAK
PSFHKFFVHECRTEAAARKIFADAGVPHYWDLAVNFKDEEL
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagaaatccagtcgcaaagacagagaatcagcaaaggaaagagagcacaag
caccgaagttccaaggacaagtctagggatgctgccagcgacgaagacgataatcgccat
caccaccgccatcgctcaaagcaccgtggcggagacgacgacgacgaccgccgcaggtcg
gacaatcgccaccgtcggcattccgaggaggattccttcgatcgggagagatcgactgag
cggcacaggagtgagagagagggaagcttagacaggcgcgagaaatctcacgatcgggac
aagcgcgagagatcgcacgagcgggaaactaagagagaagagtctgtggagaggcggcat
tttagtaagaggaaagagagaggagacagtgaggatagaaatgatggagctgagaagaga
gctagggtttccgagggaaagaatgagaatggaaaggagaaggaagatagaagggagagg
aggagatttgatgacggtgaggtgaaggaagagaggagagaaaggaagagatttgaggat
aaagtgaaacaggatgatatgggggttgatgaggaaaggatggaaagggaattccaaaat
agaacttttaagaaagaggagccagttgaagatgctcaacatgtcgattctgttgccaat
ggtctagcaatggaatcatccaacaaggcaccaaggactttgcctgaaacctctttggct
cctgttgatcctcctgctaccaaggtatcttcgatttctacaaatgaaaataagggagtt
aatattaacagatctcatgaggttcctgggaaatccagtacagatgggacagcttccggt
gctggcaagagagcaggcttctctcttgatgctttagctaaagccaagagagctttacaa
atgcaaaaggagctagcggaaaagcttaagaagattcctacattaaataagggtgctggt
ccaactagagagggtagtcaacaagtgggagctacagagagccataaagcctcatcaagt
agtgctggagtacagccagctctagttgcatcttccaattctggtatactacccacacca
gcaagtgctgccccgagcacgttagacctgcccgcaggagcctctgtcaatctaccacct
agtggcttacctcatcttgctgggctaacagcacagaaatatgaagcggttaaacgtgca
caagagcttgctgcaaagatgggatttcgacaagacccagagtttgctccccttataaac
atgtttcctgggcagatgccacaagaagttaccattcagccaaagcctgccaaagctcct
gttctccgattggatgctttgggcagggaaatagatgaacaaggaaatgttgttaatatg
cctaaaccatctagtactcttaaggtaaacatcaataaaaagaaaaaggacgctttccaa
atattgaaaccagagcttgaagttgatcctgacgaaaatccccattttgatgctaggatg
ggtcttaacaaaaataagattctaagacccaagaggatgagttttcagtttgtagaggaa
ggcaaatggtccagggatgcagaaataattaagttgaagagtcaatttggagaagcacgt
gccaaggagctaaaagcaaagcaagcacaattagcaaaggcaaaagcagagcctgatata
aatccaaatctcattgaggtctcacagagagttttcacccaggaaaagcaaaaggaacca
attcctgaggttgagtggtgggatgttcctatcttgcaatctggtgcttatggtgacatc
actgatggcaatataagtcatgataagttgaggatggagatgatcaccatttatgttcag
cacccacgccctattgagcctcctgcagaaccagctccacctccaccacaaccactgaag
ctaaccaaaaaggagcagaagaagcttcgtactcagcgtaggttggctagagagaaggac
aagcaagagatgattagacaaggactattggaaccaccaaaaccaaaagttaaaatgagt
aacctcatgaaagttcttggatcagaagccacccaagatcccacaaagcttgaaatggag
attagaagtgctgctgctgagcgtgagcaagctcatatagacaggaacatagctcgtaag
cttacccctgatgagcggcgtgaaaagaaagagaggaaactttttgatgaccccaatacc
acgctggagactatagtttctgtatacaaaatcaacgatctttcgcacccacagacccgc
ttcaaggtggatgtcaatgctcaggagaaccgtatgacagggtgtgcagtgatttcggac
ggtattagtgttgtggcagttgaaggcggcaaaaaagctattaaacgttatgggaaactt
atgctcaggcggattgattgggctgccgctgtcaaacaggaagaggatgaagacgaagac
gaggatgaagaaaagcccatcaacaagtgtgtgttggtttggcaagggagtgttgctaaa
ccaagcttccacaaattctttgttcacgaatgcaggactgaagctgcagcccggaaaatt
tttgctgatgcaggtgttccccactactgggatctcgctgtcaacttcaaagacgaagaa
ctttaa
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