Ipomoea triloba (trilobed morning glory): 116012745
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Entry
116012745 CDS
T07384
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116012745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116012745
03051 Proteasome [BR:
itr03051
]
116012745
Membrane trafficking [BR:
itr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
116012745
Proteasome [BR:
itr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
116012745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Ubiquitin_2
Dsc3_N
Rad60-SLD_2
Ubiquitin_5
RPN13_C
Motif
Other DBs
NCBI-GeneID:
116012745
NCBI-ProteinID:
XP_031108258
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All DBs
Position
3:complement(4456048..4461587)
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AA seq
555 aa
AA seq
DB search
MGGGDANVAGNNDGDNSKNNENSAAAACGSDGEAVNINIRCSNGSKFSVQATLDSSVGSF
KSLLAQHCDIPSEQQRLIYKGRILKDEQTLDSYGLKADHTVHLVRGFAPATSTNNAGATS
PGAPNTNQNASRDAAPNVGGAFGGSGPGASLFPGLNLNGLGSGGGGGLFGAGLPDFEQVQ
QQLNQNPNMMRDILNMPLVQNLMNNPEVIRNLIMNNPQMREIMDRNPELAHILNDPATLR
QTMEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATTMAGDARSD
VGSNPFAALLGVQGGGQGNPPRAGSEATTNPPAPNTNPLPNPWASASAGAEQTNTTARST
PAAGEARVAPLGGLGGLGLPDLLGGMPDPNAVNQLMQNPAISQMMQSMLSNPQYMNQILG
LNPQLRSMLDSNSQLREMMQNPEFIRQLTSPETMQQLLTFQQSLMSQLGRQQTNQETGPN
CGRPDMLMNMFGGLGTGGLGVPNRPNVPPEELYASQLAQLQEMGFFDTQENIRALIATAG
NVHAAVERLLGNPGQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggcgatgctaatgttgcggggaacaacgacggggacaattcgaagaacaac
gagaatagcgcggccgccgcctgcgggtctgatggcgaagctgtgaatatcaacatccgc
tgctccaacggctccaaattctcagtgcaggccaccctcgattcttccgtcggatccttc
aagtccctcctcgctcagcactgcgacatcccctctgagcagcagcgtttgatctacaag
ggtcggatcttaaaggatgagcaaaccctagacagctacggtttgaaggcagatcacact
gttcatttggttcgtggctttgctccagctacctctacaaataatgcaggcgcaacttct
cctggagctccaaatactaaccaaaatgcgtcaagggatgctgctccaaatgttggtgga
gcatttggaggatcaggccctggagcttcattatttcctgggcttaatttgaatggactt
ggaagtggtggtggtggtggattatttggagctggacttccggattttgaacaagtacag
caacagttgaatcaaaaccccaacatgatgagggatatcttgaacatgcctcttgttcag
aatctaatgaataacccagaagttatccgcaacttgatcatgaacaatcctcagatgcgg
gagatcatggatcgtaatccagagcttgctcacatactaaatgatcctgccactctacgg
caaaccatggaggctgcacgaaaccctgagctcatgcgtgagatgatgcgtaatactgac
agggcaatgagcaatattgaatcttccccagagggatttaacatgctcaggcgcatgtat
gaaactgtccaagagccattcctgaatgcaactaccatggctggggatgcgagaagtgat
gtggggtcaaacccttttgctgcgcttctgggagtccagggtggtgggcaaggtaatcct
ccaagagctggttctgaagccactaccaatcctcctgctcctaatactaatccgcttcct
aatccttgggcctctgctagcgctggagctgaacagactaataccaccgctaggtcaacc
cctgctgctggggaagctagggtagctccacttggtggcttaggtggacttggtttacca
gaccttctgggtggtatgccagatcccaatgcagtaaatcagttgatgcagaatcctgct
atctcacagatgatgcagtctatgctctccaaccctcagtacatgaaccagattcttggc
ctcaacccacaactgcgaagcatgcttgactccaattcccaactgagagagatgatgcaa
aaccctgaattcattcgtcaattaacttcccctgagacaatgcagcaactgttaacattt
cagcaatcacttatgtcccaattgggtcgacagcagacaaatcaagaaactggcccaaac
tgtggaaggccagatatgctgatgaatatgtttggtggactcgggacaggtggcttgggt
gtacccaacagacctaatgttccacccgaggaactgtatgcctctcagctggcacaacta
caagaaatggggttctttgatactcaagaaaacataagggctctgatagctactgcaggg
aatgttcatgctgcagtggagcgtcttctaggaaaccccggtcaatag
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