Ipomoea triloba (trilobed morning glory): 116013028
Help
Entry
116013028 CDS
T07384
Name
(RefSeq) polygalacturonase ADPG1-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Module
itr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116013028
Enzymes [BR:
itr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
116013028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
SBF_like
Motif
Other DBs
NCBI-GeneID:
116013028
NCBI-ProteinID:
XP_031108550
LinkDB
All DBs
Position
3:complement(18831400..18839834)
Genome browser
AA seq
806 aa
AA seq
DB search
MCLSRKSLYPMELFLLILILGLASSRIDCQIIFGHGESFNVLDYGAIGDGTTNDTQAFLN
AWRDACGSRVESPLLIIPQNFIFLVYPVTFWGPCNSQKIYFMISGEIIAPSSLGTWKGRD
ASEWVVFRDVKGLTIDGSGTIDGQGKAWWDNSCRYHPSLKGCTTLAPTALKFVSCNETSV
SNMYVNNSPQTHILVLDCHGFNLHNIFINSPADSANTDGIHIQSSHNFSITHSKISTGDD
CVSIGDYTSNVEINNIACGPGHGISIGSLGKSGNIVQVESINVSNVFFSGTTNGARIKTW
QVGRGIVRDVIFENLLFNYVENPIIIDQHYCNVPDACKDTGSGVNISNIVYRDIFGTSST
DVAINLNCSKSVPCTNIVMQFVQLSSATPGKIVSADCENAYGQEYGVGPTSCLLQSLISS
SRVSCTSFNVMDYGAKGDEVEDDSQAFLNAWNDACSSSSLPYPQVIIPENSTFLVNPLTF
NGPCKSEYIYFQILGTIKAPSSPESWDGRDASQWLAFRGVNGLKAEGGGIIDGQGKKWWD
QSCRYHPDLKGCTKLAPTAMKFLSCNNSSVSNIHFSSSPQTHALIFGCNGFNVSHVSVES
PGDSPNTDGIHIHASHHLSITYSNISCGDDCISIGDYTSNIEINNVQCGPGHGISIGSLG
KSGNFVQVEDIHVYNCTFNGTTNGARIKTWQTGRGYVRNITFENLQLFSVDNPIIIDQNY
CDVRGACKKLASGVEISDVVYQNITGTARRETAINLNCSRSVACTGIRMESIDITAQAAS
GTVAAYCSNARGQESVVEPGPCLQQL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctctctaggaagtctttatatcccatggaactgtttttactgatactcattctg
ggcttagcttcttcaagaattgattgccagattatttttggtcatggggagagcttcaat
gttctggactatggagctattggagatggcacaacaaatgatacccaagcatttttgaat
gcgtggagagatgcatgtgggtccagagttgaatctcctctgcttatcattcctcaaaac
ttcatatttctggtctacccagtcaccttttggggtccctgcaattcccagaaaatatat
tttatgatatctggggagataattgcaccttcttccctgggcacatggaagggtagagat
gcaagtgagtgggtggtgtttagagatgtgaagggtctcaccattgatgggtctggaaca
attgatgggcaggggaaggcttggtgggataattcatgtagataccacccatccttgaaa
ggatgcacaacattggctccaactgcattgaagtttgtttcatgcaacgaaacctcagtg
agtaacatgtacgtgaacaacagcccccaaactcatatacttgtactggactgccatggc
ttcaaccttcacaacatcttcataaactcccctgcagattctgccaacactgatggcatt
cacattcaatcctctcacaatttttctattactcattccaaaataagcactggggatgac
tgcgtttcaattggagattacacttcaaatgttgagattaacaatattgcatgtggtcct
ggtcatggcataagtattggaagcttagggaaatcaggaaatattgtgcaagtggaaagc
ataaacgtcagcaatgttttcttctctggaactacaaatggagctcgaatcaagacatgg
caggttggcagaggaatcgtcagagacgtaatatttgagaatcttttatttaactacgtc
gagaacccgataatcatcgatcaacactactgcaacgttccagatgcctgcaaggacacg
gggagtggggttaatattagcaatattgtgtaccgcgacatattcggaacatcaagcaca
gatgtggcaataaacctcaactgcagcaaatctgtaccatgtactaacatagtaatgcag
tttgtgcaattgtcgtctgctactcctgggaaaattgttagtgccgattgtgaaaatgct
tatggccaagaatatggggtggggcctacttcttgcttgcttcaatccttgatatcatca
tcaagagtttcatgcacaagctttaatgtgatggactatggagccaaaggtgatgaagtg
gaagatgattcacaagcatttttgaatgcatggaatgatgcttgttcttcatcctcactt
ccctatccacaagtgatcattcctgaaaactcaacatttctggttaatccacttactttt
aatggcccctgcaagtctgaatatatctatttccagatattagggacaattaaagcacca
agctcacccgagagttgggacgggcgcgacgcaagccagtggctagcatttaggggtgtc
aatgggctaaaggctgagggtggagggataattgatggacaaggaaagaaatggtgggat
caatcttgtagatatcatcctgatctgaaaggctgcacaaagttggctccaacagcaatg
aagtttctttcatgcaataacagcagtgtgagcaacattcattttagcagcagccctcaa
acacacgcacttatatttgggtgcaatggcttcaatgttagccatgtgagtgttgagtct
cctggagatagtccaaatactgatgggattcacattcatgcctcgcaccatttgagcatt
acctattccaatataagttgtggggatgattgcatttctattggagactacacttccaat
attgaaataaacaatgttcaatgtgggccaggccatggtataagtattggaagcttagga
aagagtgggaattttgtacaagtggaagacattcatgtctacaactgtaccttcaatggg
acaacaaacggagctcggatcaagacatggcagactggcagaggatacgtccggaacata
acattcgaaaatctgcaactcttttcagtagataaccccatcatcatagaccaaaactac
tgcgatgttcgcggggcatgcaaaaaattggcaagtggggttgaaatcagcgatgtagtg
tatcaaaacataactggaacagcaagaagagaaacagccataaacctaaactgcagtaga
tctgtagcgtgcactggaataagaatggagtccatagacataacagcacaggcagcctca
gggacggtggctgcttattgtagcaatgctcgtggacaggaaagtgttgtggagcctggg
ccttgtctccaacaactctga
DBGET
integrated database retrieval system
