Ipomoea triloba (trilobed morning glory): 116013157
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Entry
116013157 CDS
T07384
Name
(RefSeq) uncharacterized protein LOC116013157
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116013157
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116013157
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR75_1st
ANAPC3
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
TPR_1
NBCH_WD40
TPR_19
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
116013157
NCBI-ProteinID:
XP_031108670
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Position
1:complement(35474065..35486460)
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AA seq
1248 aa
AA seq
DB search
MESLCFHDGNITDMINIRTLDIRHDTGHRFQMHSSLVRRLSLERELEGHQGCVNTIAWNS
RGSLLISGSDDTKMNIWNYSNHKLLHSIETGHSANIFCTKFVPETSDELVVSGAGDAEVR
LFHLSHLRGRGLDENSISPSAVFQCHTRRVKKLAVEIGNPNVVWSASEDGTLRQHDFREG
ASCPTPGSSHQECRNILLDLRCGGKKSLADPPKQFFALKSCDISLTRPHLLLVGGSDVFA
RLYDRRMLPPLSSSQKKLAPPSCVNYFCPMHLSDRGRSSLHLTHVTFSPNGEEVLLSYSG
EHVYLMDLNPTRSSMRYSSSDVAKLMNFNAVIKEVELQSSVTGIFLNVSSLRSQATAKLD
KCRKLIQTAEKSLKEGKKYYYGIEACNEVLHGYGDEIGPMLTYECLCIRAALLLKRKWKN
DAHMAIRDCHKARKINSTSFGALLLIAEALLQLGKHKEALEFAICAQSLAPSGTEAAEKV
ENLKKHITSAEAEKTNKEHGEFKSEPEVGRVLSLSDILYRSDANSDVSQDGPRSEREDSD
EEDLELAFETSVSGDESHDTEPNLIQGGLNLRFHTRGDSSMENRRNGSCGSPTSLCQDPK
VSYQPEAVIDMKQRYIGHCNVGTDIKQASFLGQSGMPGFLFDMLVEIGNPNVVWSASEDG
TLRQHDFREGASCPTPGSSHQECRNILLDLRCGGKKSLADPPKQFFALKSCDISLTRPHL
LLVGGSDVFARLYDRRMLPPLSSSQKKLAPPSCVNYFCPMHLSDRGRSSLHLTHVTFSPN
GEEVLLSYSGEHVYLMDLNPTRSSMRYSSSDVAKLMNFNAVIKEVELQSSVTGIFLNVSS
LRSQATAKLDKCRKLIQTAEKSLKEGKKYYYGIEACNEVLHGYGDEIGPMLTYECLCIRA
ALLLKRKWKNDAHMAIRDCHKARKINSTSFGALLLIAEALLQLGKHKEALEFAICAQSLA
PSGTEAAEKVENLKKHITSAEAEKTNKEHGEFKSEPEVGRVLSLSDILYRSDANSDVSQD
GPRSEREDSDEEDLELAFETSVSGDESHDTEPNLIQGGLNLRFHTRGDSSMENRRNGSCG
SPTSLCQDPKVSYQPEAVIDMKQRYIGHCNVGTDIKQASFLGQSGDYIASGSDDGKWFIW
EKKTGRLVKMLHGDEAVVNCIQCHPYDCVVATSGIDNTIKIWTPIDLVSSSVSGQVGPET
SNILDAMENNQRKICRTRETILPFEFLDRFRMREFAEGGMQPFECTQG
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggagtcactgtgctttcacgatggcaacattaccgacatgatcaatatccgtactctc
gacatccgccatgacactggccatagatttcaaatgcactcctctttggtacggaggctg
tccttagaaagggaattagaggggcatcaaggttgcgtcaatactattgcttggaattca
agagggtcacttttgatatctggatctgatgatacgaaaatgaatatatggaactattca
aaccacaagctactgcacagtattgagactggccattcagcaaatatattctgcacaaaa
tttgtccctgaaacatcggatgagctagttgtttctggagccggggatgctgaagttcgg
ctttttcacttgtctcatttaaggggaagaggtcttgatgagaattctatcagcccatca
gcagtgtttcagtgccacactcgaagggtcaaaaaattagctgttgagattggaaaccca
aatgttgtatggagtgcaagtgaagatggaactttgaggcaacatgattttcgagagggt
gcttcctgccctactcctggttcttctcatcaagaatgccgtaatattcttcttgacttg
cgctgtggaggtaagaagtcattggctgatccgcctaagcaattttttgctttaaagtct
tgtgatatcagcttgactaggccccatttgcttcttgttggtgggagtgatgtttttgct
cgtttgtatgatagaagaatgctgccaccattgtcctctagtcagaaaaagttggcacct
ccttcatgtgtcaattatttctgtccaatgcatctctctgaccgtggtcgttctagcttg
catctaactcatgttacgtttagtcccaatggtgaagaggttctgcttagctacagtggc
gagcatgtgtacttgatggatttaaatcctacacgaagttctatgcggtattcctctagt
gatgttgctaaacttatgaactttaatgctgttatcaaggaggtggagttgcagtcatca
gtaactggtatctttttaaatgtatcttcactaagaagtcaagccactgccaagcttgat
aagtgcagaaagttgattcagactgcagaaaaatcactgaaagaaggcaaaaagtattat
tatggtattgaagcctgtaatgaagtcttgcatggttatggggatgaaataggacctatg
ctaacttatgagtgtctatgcattcgagccgccttattgctcaagagaaagtggaaaaat
gatgcacatatggctataagagattgtcataaagctagaaagattaattcaacttcattc
ggggcactacttttgatagctgaagctctgttacagttaggaaaacataaagaagctctt
gagtttgctatttgtgctcagtcattggctccttctggtactgaagctgcagaaaaggtc
gagaatttaaaaaagcatatcacttcagctgaagcggagaaaactaacaaggaacatgga
gaatttaaatctgaacctgaggttgggcgggtgttgtcattgagtgacatactctatcgt
tcagatgcaaatagtgatgtttcacaagatggtccaaggtccgagagagaagattctgat
gaagaggatctggaattggcttttgaaacctcagtaagtggggatgaatcacatgatact
gagcctaatttaattcaaggaggtttgaatttgaggtttcatactagaggtgattcaagt
atggagaacagaaggaatggttcttgtgggtcaccaacatcattgtgccaagatccaaaa
gtgtcctaccagcctgaggcagtgatagatatgaaacagagatacattggtcactgtaat
gtaggcactgatataaaacaagctagttttcttggccaaagtggtatgcctggcttttta
tttgatatgttagttgagattggaaacccaaatgttgtatggagtgcaagtgaagatgga
actttgaggcaacatgattttcgagagggtgcttcctgccctactcctggttcttctcat
caagaatgccgtaatattcttcttgacttgcgctgtggaggtaagaagtcattggctgat
ccgcctaagcaattttttgctttaaagtcttgtgatatcagcttgactaggccccatttg
cttcttgttggtgggagtgatgtttttgctcgtttgtatgatagaagaatgctgccacca
ttgtcctctagtcagaaaaagttggcacctccttcatgtgtcaattatttctgtccaatg
catctctctgaccgtggtcgttctagcttgcatctaactcatgttacgtttagtcccaat
ggtgaagaggttctgcttagctacagtggcgagcatgtgtacttgatggatttaaatcct
acacgaagttctatgcggtattcctctagtgatgttgctaaacttatgaactttaatgct
gttatcaaggaggtggagttgcagtcatcagtaactggtatctttttaaatgtatcttca
ctaagaagtcaagccactgccaagcttgataagtgcagaaagttgattcagactgcagaa
aaatcactgaaagaaggcaaaaagtattattatggtattgaagcctgtaatgaagtcttg
catggttatggggatgaaataggacctatgctaacttatgagtgtctatgcattcgagcc
gccttattgctcaagagaaagtggaaaaatgatgcacatatggctataagagattgtcat
aaagctagaaagattaattcaacttcattcggggcactacttttgatagctgaagctctg
ttacagttaggaaaacataaagaagctcttgagtttgctatttgtgctcagtcattggct
ccttctggtactgaagctgcagaaaaggtcgagaatttaaaaaagcatatcacttcagct
gaagcggagaaaactaacaaggaacatggagaatttaaatctgaacctgaggttgggcgg
gtgttgtcattgagtgacatactctatcgttcagatgcaaatagtgatgtttcacaagat
ggtccaaggtccgagagagaagattctgatgaagaggatctggaattggcttttgaaacc
tcagtaagtggggatgaatcacatgatactgagcctaatttaattcaaggaggtttgaat
ttgaggtttcatactagaggtgattcaagtatggagaacagaaggaatggttcttgtggg
tcaccaacatcattgtgccaagatccaaaagtgtcctaccagcctgaggcagtgatagat
atgaaacagagatacattggtcactgtaatgtaggcactgatataaaacaagctagtttt
cttggccaaagtggtgattatattgctagtgggagtgatgatggtaaatggttcatctgg
gaaaaaaaaactggcaggcttgtaaaaatgcttcatggagatgaagctgttgtaaattgt
atacagtgtcatccatatgattgtgttgtggctactagtgggattgacaacaccataaag
atttggactccaattgatttggtatcttccagtgtgtctggtcaagtaggaccagagact
tcaaatattctagatgctatggaaaacaatcagcgcaaaatatgccgtactcgcgaaaca
attctgccttttgaatttctggataggttcaggatgagagagtttgcagaaggtggcatg
cagccatttgaatgcacacagggttaa
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