Ipomoea triloba (trilobed morning glory): 116013375
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Entry
116013375 CDS
T07384
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116013375
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116013375
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
U-box
Motif
Other DBs
NCBI-GeneID:
116013375
NCBI-ProteinID:
XP_031108946
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Position
3:664173..666866
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AA seq
443 aa
AA seq
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MKGFMIILFFTCAAMAPVLMAHIGDFDEVWQRRLLEAQEHALNTYESDPFNVTVAFNREV
QKVLEIKEAIGRNSTTRKLLGTKHYNGPCNATNPIDRCWRCHSNWETNRKRLAACGLGFG
RKAIGGKNGKIYVVTDSSDDPTDPKPGTLRHAAIQKKALWIIFKRDMIIRLNQELIMQGD
KTIDGRGARVHISGGAGITLQFVKNVIIHGIHIHNIVRGNGGLVRDAEDHLGLRTMSDGD
GISIYGSSDIWIDHLSMKNCKDGLIDAIEGSTGITISNSHFTDHNEVMLFGAADSTSIDE
IMQITVAFNHFGKRLVQRMPRCRWGYIHVVNNDYTHWNMYAIGGSKHPTIISQGNRYIAP
PADTFKKEITKRLYATEAEWSEWTWRSQGDVFMNGAFFVQSGDPNFINKHPQLYDGITAF
KGEEVTWLTRFAGALNCRAGRPC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaagggatttatgatcattttgtttttcacttgtgctgccatggctcccgttctcatg
gctcatattggcgacttcgatgaggtgtggcagaggcgtctcttagaagctcaggagcat
gccctcaacacatatgaatctgatccttttaatgtcacggttgcattcaatcgtgaagtt
cagaaggtattagagataaaggaagccataggaaggaacagcacaactcggaagctacta
ggaaccaagcattacaacgggccatgcaacgctacaaatccaatcgaccgttgctggcgg
tgccattcaaattgggaaactaaccggaaaaggttggcggcgtgcgggctcgggttcggg
cggaaagccatcggtggcaagaatgggaagatctacgtggtgacggacagctcggacgat
ccaacggatccgaagccggggacgctccgtcacgccgcgatacaaaagaaggcattgtgg
atcatcttcaaacgtgacatgatcatcaggcttaaccaggagctgatcatgcagggcgac
aagacgatcgacggtcgaggagcgagggtccacattagcggcggcgccggcatcaccctc
cagtttgtgaagaacgtgatcatccacggcattcacatccacaacattgtacgaggcaat
ggcggcctggtcagagacgcggaggaccaccttgggctccgcaccatgagcgacggcgac
ggcatttccatctatggttcgtctgatatttggatcgaccacctttccatgaagaactgc
aaggatggcctcatcgacgccatcgaaggctccaccggtatcaccatttcaaacagccat
ttcactgaccataacgaggtaatgctgtttggtgcggcagatagtacatcaatagatgag
atcatgcaaatcacagtggcattcaaccactttgggaagagattggtacagaggatgccg
aggtgcagatggggatacattcacgtcgtcaataacgattacactcactggaatatgtac
gccattgggggtagtaagcacccgaccattatcagccagggtaaccgatacatagcccct
ccagctgacaccttcaagaaagagataactaagaggctttatgcgacggaagctgagtgg
agtgagtggacatggagatcacaaggagatgtgttcatgaatggggcattcttcgtccaa
tcaggagatccaaacttcatcaacaagcatcctcagttgtacgatggcataacagcattt
aagggagaggaagtgacttggttgaccaggtttgcaggagcactcaattgcagggcaggt
cgaccatgctga
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