Ipomoea triloba (trilobed morning glory): 116013383
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Entry
116013383 CDS
T07384
Name
(RefSeq) KH domain-containing protein At4g18375-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116013383
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116013383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
HcgC
Motif
Other DBs
NCBI-GeneID:
116013383
NCBI-ProteinID:
XP_031108956
LinkDB
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Position
3:complement(6125574..6130772)
Genome browser
AA seq
666 aa
AA seq
DB search
MEGHKRNPLKRRPSPQFKKKGGPKRGKWNNPIPRRSSEKAHVSDTVYRILCQSRKIGSVI
GKGGSIIKALREETQAKITVEDSVPGSDERVIIVSSPSAQLPEVTEDVDMEPHCAAQDAL
LKIHEKIVEEDLDGAGDEDNNEISVTTRLLVPNNLVGCVLGRKGDVIQRLRSEIGASIRV
LPPENLPSCAMSTDELVQVSGTPSLVKRALYEISTLLHENPRKDKPPMSYPVAHGVQGFR
SSDFPMGGMLPPGNSVWPRRNHNLNGMSHLPEVGGYENQPSRYGVENFDIVPPPHGGEPP
TEFTMKILCLASKIGGVIGKGGLNVRQLQQETGASIHVEDVSADSDERVIRVSSIEALWD
PISQTIKAILQLQSQTSEFSDKGIITTRLLVPSSKVGCILGQGGQVINEMRRRTKADIRV
FSKEEKPKCASKDEELVQISGTFGVAKDALTEIASRLRTRSLRDSNAKVEPAPLRMAPGF
GPPGDFPVVSLPPHGGLGTGSSSRFDYLKGDVREYDLPNYPGLPNSMRYPNISSPTNLKI
PNSTMSSVIGTGGSNIPEHAASRMKLRDPQLGGPEHFAEIHRPMEHWSPPRNNYQGLVSS
SGQTSNPQQGAYQSYTVQQGAYSQYSPSGMHYQNVNAYEAPHQSIQAQLPSYPNTNAQGS
TNFDIR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggaaggacataaaagaaaccctttaaagcgacgccctagtcctcaatttaagaaaaag
ggtggtcctaaaagagggaagtggaataaccctatccctagaagatcttctgagaaagca
catgtttctgatactgtttatcgtattctttgtcaatcaagaaagattggtagtgtaatt
ggtaaaggtggtagtataatcaaagccttgagagaagagactcaagcaaagatcacagtt
gaagattctgttcctggttcggatgagagagtgataattgtctctagtccatctgcacaa
ttaccagaagttactgaagatgtggacatggagccacattgcgctgcccaagatgctctt
ttaaaaatccatgagaagattgtcgaggaagacttggatggagcaggagatgaagataac
aatgaaatttcagtcactacacgtcttcttgttccaaacaatttagttggttgcgtttta
ggtagaaaaggagatgttattcaaaggttacgaagtgaaattggtgcaagcattcgtgtt
cttcctcctgaaaatctgccctcctgtgctatgagtactgatgaattggttcaagtatca
gggacaccttctctggtaaaaagagctctgtatgaaatatcaacattgttgcatgaaaat
ccacgcaaagataaacctcccatgagttatcctgtggctcatggtgtacaaggttttaga
tcttctgattttcccatgggaggtatgctcccccctggaaattcagtgtggcctaggcgt
aaccataatttaaatggtatgtcacatctgccagaggtgggaggatatgagaaccagcct
tccagatatggagttgagaattttgatattgttcctcccccacatggcggagaacctcca
actgaattcactatgaaaattttatgcttggcttcaaagattggtggagttattggcaag
ggaggccttaatgtgagacaactgcagcaagagacaggggctagtattcatgtcgaggat
gtatcggctgattctgatgaaagagttattcgtgtctcctctattgaggctctttgggac
cccatatcacaaactatcaaagcaatccttcagcttcagagtcaaactagtgaattttct
gataagggaattatcactactaggcttcttgttccctctagtaaggttggctgcattctt
ggacaaggaggtcaagttataaatgaaatgaggaggaggactaaggcagacattcgtgtt
ttctcaaaggaagagaagcccaaatgtgcttccaaggatgaagaacttgtgcagatttcg
ggtacttttggtgttgctaaagatgccttgactgagattgcatcaagacttagaacacga
tcccttcgagattcaaatgctaaagtagaacctgctcccttaaggatggccccagggttt
ggtcctcctggagacttccctgttgtcagtctacctccacatggtggcttaggtacaggc
agctctagtagatttgactacttgaagggtgatgttcgtgaatatgaccttcctaattat
ccaggtcttccaaactccatgagatatccaaatatcagtagtcctacaaatctgaagatt
ccaaacagtaccatgagttctgtaattggtacaggagggagcaatatacctgagcatgct
gcatcaaggatgaaacttcgtgatcctcagcttggtggtcctgaacattttgccgagatc
cacagacctatggagcattggagccctccacggaataattatcaaggattggtttcttct
tctggtcaaaccagcaatcctcagcaaggtgcgtaccaaagttatactgtccagcaagga
gcctactctcagtacagcccttcaggaatgcactaccaaaacgttaacgcctatgaagct
cctcaccaaagtatccaggcgcaactaccatcatatccaaacacaaatgcacaaggttct
accaattttgatatcagatag
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