Ipomoea triloba (trilobed morning glory): 116013387
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Entry
116013387 CDS
T07384
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116013387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116013387
03012 Translation factors [BR:
itr03012
]
116013387
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
116013387
Translation factors [BR:
itr03012
]
Eukaryotic type
Release factors
116013387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
She2p
Motif
Other DBs
NCBI-GeneID:
116013387
NCBI-ProteinID:
XP_031108966
LinkDB
All DBs
Position
3:16164527..16167377
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AA seq
437 aa
AA seq
DB search
MADGQEHDKNIEIWKMKKLIKALESARGNGTSMISLIIPPGDQISRVTKMLAEEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTFDFAPFKPIN
ASLYLCDNKFHTEPLGELLESDEKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKFFEEISQDTG
KYVFGVDDTIKALEMGAVETLIVWENLDINRYMLKNSVTNEIIVKHFNKDQETNHSNFKD
PATSAELEVQDKMPLLEWFANEYRNFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RDFDEPSDEGELYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggtcaagagcatgacaagaatattgaaatatggaaaatgaagaaactgatt
aaagctctagaatctgcaagaggaaatggtaccagcatgatctcccttatcatacctcca
ggtgaccaaatttctcgagttacaaagatgttggcggaagagtatggaactgcatcaaat
atcaaaagcagagtgaaccggcagtctgtcctgggtgcaataacatctgcccagcaaagg
ctcaaactttataacaaagtcccccctaatggactggtgctctatacaggaactattgtg
acggatgatgggaaagaaaagaaggtcacctttgactttgcaccttttaagcccattaat
gcttctttatacctgtgtgacaataaatttcacactgaacctctgggtgaacttttggaa
tctgatgagaagtttggttttattgtcatggatgggaatggcaccctttttggtacctta
agtggaaacaccagagaagtgcttcacaaattcactgttgatctcccaaagaagcatgga
agaggagggcaatcggctcttcgatttgctcgtcttcgaatggagaaacgacacaattat
gttaggaagacagcagagcttgctacacagttctttattaaccctgcaacaagccagccg
aatgtttctgggttaattcttgctggatctgctgatttcaagactgagctaagtcaatca
gatatgtttgatcctcgattacaagctaagatccttaatgtggttgatgtgtcttatggt
ggggagaatggtttcaaccaggcaatcgagttgtctgctgagattctgtctaatgtgaag
tttatacaggaaaagaagttgatagggaagttctttgaggaaattagtcaagatactggg
aaatatgtatttggtgtggatgacacaataaaagctctcgagatgggagctgttgaaaca
cttattgtgtgggagaatcttgatattaatcgttatatgctgaaaaacagtgttaccaat
gagattattgtcaaacactttaacaaggaccaagagactaatcatagcaacttcaaggat
cctgccacgtctgctgagttggaggttcaagacaaaatgccacttctggagtggtttgcc
aatgagtacaggaattttggttgttcacttgaatttgttaccaacaagtctcaagaggga
tcccagttctgtagagggtttggtggcattggtggaatccttcgataccagcttgacatg
cgcgattttgatgagccttctgatgaaggagaattgtacgaagattccgattaa
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