KEGG   Ipomoea triloba (trilobed morning glory): 116013396
Entry
116013396         CDS       T07384                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g18940, chloroplastic
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
itr  Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:itr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:itr03016]
    116013396
   03029 Mitochondrial biogenesis [BR:itr03029]
    116013396
Transfer RNA biogenesis [BR:itr03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    116013396
Mitochondrial biogenesis [BR:itr03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    116013396
SSDB
Motif
Pfam: PPR_2 PPR_3 PPR PPR_1 TPR_24 PPR_long Mtf2 TPR_25
Other DBs
NCBI-GeneID: 116013396
NCBI-ProteinID: XP_031108981
LinkDB
Position
3:29828688..29831487
AA seq 822 aa
MEGTLFPNKPILPLQSTKPPKPAPPLPSSNQRLKLNTTTLPLPPLHLHNFPSPQPSFPLD
SLLQHLNGTSQDAHSQKRIAIPRTSQDPTVEDDDSDDGSLDFLPENCKSMLNSILQQPLS
ALRAFLGSVKFELLEMDLMSLLKGLDVWGNWERAILLFEWVVMNSNAESEKLDSQVIEYM
VRVLGRESQHLLASNLFDVIPLEDHSLDIRAWTTVLHAYSRSAKYDKAIALYEYIKERGL
SPNLVMYNVMLDVYGRKGRSWDMILCLLDEMRSNGLEFDEFTCSTVISACAREGLFEEAK
KFFDGLKSQGYVPGTVAYNSLLQVYGKMGAYSEAVSVLEEMEENNCPPDSVTYNELVGAY
VRAGFHEEGAALIETMTRKGLKPNAITYTTLIDAYGKAGKEGKAFSLLEQMKQSGCVPNV
CTYNSIIAMLGKKSRIEETMEVISDMKLNGCTPNRITWNTVLAMCGNSGMQKYVNRVFHE
MKRCGFEPNRDTFNALICAYARCGSDFDAGKMYDEMIKAGFTPCVNTYNAFLNALAHRGD
WRAAESVMLDMKNKGFKPSETTYSLMLHCYSKGGNARGVERIAKEVYDGHIYPSWMLMRN
LVLSNVKCKSLQGTERAFQELQKNGYRPDLVVFNSMLSIFARNVMYDRANEIMRLIRENG
LQPDLLTYNTLMDMHARAGDCWKAEDILNGVEEEIGEKPDRVSYNTVIKGFCRQGLMQEA
VKHFSNMTAAGIQPCIITYNTFVAGYASQGMFSQVNELISYMIQHNCRPNELTYKTVVNG
YCRARRYEDAIDFVSAIREKDTYFDEQSLQRLSALVRDCMQF
NT seq 2469 nt   +upstreamnt  +downstreamnt
atggagggtacccttttccccaacaagccaatattgccacttcaatcaacaaagccgccg
aaaccggcacctcctctgccctcctccaaccagcgcttgaaattaaacaccacaacgctt
cctctccctcctctccatctccacaacttcccttctcctcaaccctctttccctctcgac
tctcttcttcagcacctaaacggcacttcacaagatgctcattcgcagaaacggattgca
attccgagaactagtcaggatcccacggttgaggatgatgatagtgatgatgggtcgctt
gattttctcccagagaattgtaagtcaatgctcaattcaattctccaacagcccttgtcc
gcgttgcgtgcatttcttggttccgtgaaatttgagttgcttgaaatggatttgatgagt
ttactgaaagggttggacgtttggggcaactgggaaagggccatcttgttgtttgaatgg
gttgttatgaattccaatgctgaaagtgaaaagctagatagtcaggttattgaatatatg
gttagggttttggggagagaatcccagcacttgttagcctccaatctgtttgatgttatt
ccacttgaggatcactcactggatattagagcttggaccactgttcttcatgcttactct
cgtagtgccaagtatgataaggcaattgcattgtatgaatatattaaggagagaggttta
tcccctaatttagtcatgtacaatgttatgctggatgtttatggtaggaagggtaggtct
tgggatatgatattgtgccttctagatgagatgaggagcaatgggcttgagtttgatgag
ttcacttgcagcacggttatatctgcgtgtgctagggaagggttgtttgaagaagccaag
aagttttttgatggattgaagtcgcagggctatgttccggggacagttgcttacaattcc
ttgcttcaagtttacgggaagatgggggcgtactctgaggctgtgagtgtgcttgaagaa
atggaggaaaacaattgccctcctgattcggtgacatataatgagcttgtgggtgcttat
gtgagggcaggtttccatgaagaaggtgctgcgcttatagaaactatgactcggaagggt
ttaaagccaaacgccatcacttataccacattgatagatgcttatggtaaagctgggaaa
gagggcaaggcttttagcttactcgaacagatgaaacagtctggctgtgttcctaatgtg
tgtacatataattcaatcattgcaatgctggggaagaaatctcggatagaagagacgatg
gaggtaatctctgacatgaagttgaatggatgtacccctaataggattacttggaacacg
gtacttgcaatgtgtgggaatagtggaatgcagaaatatgtgaaccgcgtttttcatgag
atgaagagatgcgggtttgaacccaacagggacacgtttaatgctttgatttgtgcatat
gcgaggtgtggatcagacttcgatgcaggtaaaatgtatgatgagatgatcaaagccggg
tttactccatgtgtcaatacttataatgcatttctaaatgccctggctcataggggtgat
tggagagctgctgaatctgttatgttggacatgaaaaacaaaggattcaagcccagtgaa
accacttattctttgatgctccattgctactcaaagggagggaatgcaagaggcgtagaa
aggattgcaaaagaagtttacgacgggcatatttatcctagttggatgcttatgagaaac
cttgttctttcaaatgttaagtgtaaatcgctgcaaggcacagagagagcttttcaggaa
ttacagaagaatgggtacagacctgatttggtggtgtttaattccatgctttccatattt
gcgaggaatgtgatgtatgatcgggcaaatgaaataatgcgattgattcgagagaatggc
ctgcagccagatttgttaacctataataccttaatggatatgcatgcaagagctggtgac
tgttggaaagcagaagatatcctgaatggagtggaggaagaaatcggtgaaaaaccagat
cgcgtgtcctacaacactgtcatcaaagggttttgtagacaagggcttatgcaggaagct
gtgaaacatttctccaacatgacagcagctgggattcaaccttgtatcattacgtacaac
acattcgttgctgggtatgcatcacaaggcatgttttcacaagtaaatgaactgatcagt
tacatgattcagcacaactgcagaccgaatgagctcacatacaaaactgttgtaaatggt
tactgtagagcaagaagatatgaggatgctattgattttgtttctgcaattagggaaaaa
gacacttactttgatgaacaatcgctgcaaagactttctgctctggtaagggattgtatg
cagttctga

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