Ipomoea triloba (trilobed morning glory): 116013438
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Entry
116013438 CDS
T07384
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116013438
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
itr01009
]
116013438
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
116013438
Protein phosphatases and associated proteins [BR:
itr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116013438
Spliceosome [BR:
itr03041
]
Common components
Common spliceosomal components
SR proteins
116013438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
RRM_5
CoV_nucleocap
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
116013438
NCBI-ProteinID:
XP_031109052
LinkDB
All DBs
Position
3:complement(4735663..4738710)
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AA seq
251 aa
AA seq
DB search
MADSPRKRHSRSPSPWEERSRSRSRSRSLSRPRGRSTSRGRGRDPPPSNPGDTLYVTGLS
TRVTERDLEDHFSKEGKVKSVFLVVEPRSRVSRGFAFVTMDNVDDANRCVKHLNQSVLEG
RYITVEKSRRKRPRTPTPGHYLGLKNSRAEGYRGDRGDRGDRGRYRGYDDYAYHRRSPRR
SPYRGGRDYSPRRSPYGGGRDYSPRRSPYGGGRDYSPPRRSPYGGRSRREMSRSYSPYHP
LERNYGHGSRI
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggccgactctcctcggaaaaggcattcacgctctccttccccttgggaagaaaggtca
agatcaagatctaggtctaggtcattgtcaagacctaggggaagatccacatccagaggt
cgtggcagggacccgcctccttctaatcctggagatactctctatgtgactggtttatct
acaagggtcacagaaagggaccttgaagaccacttctctaaggaaggaaaggtaaaatca
gtatttttggtagtggagccacgttctcgtgtttctcgtggttttgcttttgtaacaatg
gacaatgttgatgatgccaatcgctgcgtaaagcacctcaatcagtctgttcttgaaggt
cgatacataactgtggagaagtcccgaaggaaacgacctagaactccaacacctggacac
tatcttggactcaagaacagcagggcagaaggttatcgtggcgaccgtggtgatcgtggc
gaccgtggaaggtaccgtggctatgatgactatgcataccaccgaagatctccaaggcgc
tcaccatatcgaggcggtcgagactattctccaaggcgttcaccatatggaggtggtcgt
gattattctccaaggcgatcaccatatggaggcggtcgagattattctccaccaaggcgt
tcgccttatggtggaagatcaaggagggagatgtctcgatcatattctccttaccaccct
cttgaaaggaactatggtcatggttccagaatctag
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