Ipomoea triloba (trilobed morning glory): 116013486
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Entry
116013486 CDS
T07384
Name
(RefSeq) DNA-binding protein SMUBP-2
Organism
itr
Ipomoea triloba (trilobed morning glory)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
DEAD
SMUBP-2_HCS1_1B
Helicase_RecD
Viral_helicase1
ResIII
Flavi_DEAD
PIF1
UvrD-helicase
AAA_22
T2SSE
SLFN-g3_helicase
UvrD_C_2
ATPase_2
AAA_16
ATPase
nSTAND3
NPHP3_N
cobW
DAP3
AAA
AAA_5
TrwB_AAD_bind
MobB
NACHT
Rad17
Adeno_IVa2
TsaE
Motif
Other DBs
NCBI-GeneID:
116013486
NCBI-ProteinID:
XP_031109128
LinkDB
All DBs
Position
3:complement(25375659..25381572)
Genome browser
AA seq
988 aa
AA seq
DB search
MEASCVFCGGASSFLGIRVRPQRDSLHSSFFASVTPFGGNSSFSRAGASISFASPLPHCR
FQVANSNGGGTKAVRTAKRKTRKSWGPGPVKNSQDLKSSPVSSSVEFERQGRRKPALTRK
NTNTPANIAALYQNGDPLGRRDLGKCVVTWISLGMKAMAIDFATAEVQGEGEFSELRQQM
GPGLTFVIQAQPYLNAVPMPLGLEAICLKACTHYPTLFDHFQRELRDVLKDLQTKSLVQD
WRETESWKLLKELACSAQHKAIARKLPQPKPIQGVLGMDIDKAKAIQSRIDDFTKQMSAL
LRIERDAELEFTQEELNAVPTPAEENSKPLKPIEFLVSHAQPEQELCDTICNLHAVSTST
GLGGMHLVLFKVEGNHRLPPTNLSPGDMVCVRNCDSRGAGATSCMQGFVNNLGEDGCSIT
VALESLRGDPTFSKLFGKNVRIDRIHGLADTLTYERNCEALMMLKKKGLQKKNPSIAVVA
TLFGDQEDVAWLEKNDLADWAEVELDASIDSKGYDISQRRAIALGLNKKRPILIVQGPPG
TGKTGLLKELISLAVQQGERVLITAPTNAAVDNMVEKLSDVAIDIVRFGNPAKISSVVNS
KSLTEIVNTKLADFRAELERKKTDLRKDLRHCLNDDSLAAGIRQLLKQLAKSLKKKEKET
VREVLSSAQVVLATNIGAADPLIRRLDTFDLVIIDEAAQAIEPSSWIPILQGKRCILAGD
QFQLAPVILSRKALEGGLGISLLERAASLHEGMLSTKLTTQYRMNDAIASWASKEMYGGS
LKSFPQVASHLLVDSPFVKPTWITRCPLLLLDTRMPYGSLSTGCEEHLDPAGTGSFYNEG
EADIVVKHVLALVYSGVSPVAIAVQSPYVAQVQLLRDRLDEIPVTTGVEVATIDSFQGRE
ADAVIISMVRSNNMGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLRHIR
YSGKVKNAEPGSFGGFGLGMDPMLPTAS
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatcgtgcgtgttctgcggcggcgcgtcgagcttcctcggtataagggtgcgg
cctcagagggattccctccattcttctttctttgcttctgttactccgttcggcgggaac
agtagcttctctcgtgccggcgcctccatctccttcgcctcgcctttgccgcattgccgc
ttccaggtcgccaactccaatggcggaggcaccaaggccgtccgtactgccaaacggaaa
acccgcaagtcctggggacccggacccgtgaagaattctcaggatttgaaaagttcccca
gtgagctcgtcggttgagtttgaacggcaaggacgaaggaagccggcgctaacaaggaaa
aatacgaacacgccggctaacattgccgcgctgtaccaaaacggcgacccgctggggcgg
agggatctcggcaagtgcgtggtgacgtggattagtctaggtatgaaagccatggctata
gattttgctacggcggaggttcaaggggagggggaattctcggagctccggcagcaaatg
ggccccggtctgaccttcgttattcaggcgcagccttacctcaacgccgtgccgatgccg
ctaggcctcgaggccatctgcttgaaagcctgcacccattaccctaccctcttcgaccat
ttccagcgggagcttagggatgttctcaaggaccttcagaccaagtctttggttcaagat
tggcgggaaaccgagtcatggaagcttctcaaggaactcgcttgttcagctcaacacaaa
gcaattgcgagaaagcttcctcagccgaaacctatacaaggtgtcttgggaatggacatt
gataaggcaaaggcaattcaaagcaggatagatgatttcactaagcagatgtctgctctc
cttcgaattgaaagggatgctgaattggagttcacacaggaggagctgaatgctgttccc
acaccagctgaagaaaattcaaaacccttgaagcctattgaattcttggttagccatgcc
cagcctgagcaggaactgtgtgacactatctgcaatctccatgctgttagcacgtccaca
gggttgggcggaatgcatttggtgttgttcaaagtggagggaaatcacagattgccaccc
actaacctttcccctggggacatggtttgtgtgaggaattgtgacagtaggggagctggt
gctacttcttgcatgcaagggtttgttaataacctaggagaggatggttgtagcattact
gtggcccttgaatcccttcgtggagatcctactttctcaaagctctttgggaagaatgtg
cggatagatcgcattcatggattggccgacacgctcacatatgagcgtaattgtgaggcc
ttgatgatgcttaagaagaaagggttacagaagaaaaacccttcaatagctgtcgtggct
acactttttggagaccaagaagatgttgcatggctggagaagaatgatttggcagactgg
gctgaagtggaattagatgcatcaattgacagcaaaggttatgacatctcccagagaagg
gcaattgcattaggtttgaataaaaagcgacctatcctgattgtacaagggcctccaggc
acagggaagacaggtttgctgaaggaattgatttcacttgctgttcaacaaggtgaaagg
gttcttataacagcccctacaaatgcagcggtggacaatatggtagaaaaactgtctgac
gttgcaatagacattgttcgttttggaaatcctgcaaagatatcctctgtagtaaattcg
aaatctttaactgagattgtgaatactaaacttgctgactttcgggcggagttagagagg
aagaaaacagatctgaggaaggacctgagacattgtttgaatgatgattctttagcagct
ggcatacgtcaacttctgaaacaacttgcaaagtccttgaagaagaaggaaaaggaaact
gtaagagaagttttgtcaagtgctcaggttgtgcttgcaacaaatataggggcagctgat
ccactaattaggcggttggacacatttgacttggttataatagatgaagcagctcaggca
attgaaccatcttcttggatacctatattgcagggaaagcgttgtattcttgcaggggac
cagttccagcttgctcctgtgatcctttctaggaaagccctagaaggaggtcttggaata
tcacttctagaaagagcggcatctttgcatgaaggaatgctctctacaaaactaaccaca
cagtacaggatgaatgatgccattgccagctgggcttcaaaggagatgtatggtggatca
ttaaaatcttttccacaagttgcttctcatcttcttgtggattccccttttgtcaagccc
acatggataactcggtgcccactgctattgcttgatacaaggatgccctatggaagttta
tctactggttgtgaagagcatttagacccagctggtactggttccttttacaatgaaggg
gaagcagacattgttgttaaacacgtcctggctctagtttattctggtgttagtcctgta
gccattgctgtgcaatctccatatgttgctcaagtgcagctactgagagacaggcttgat
gaaatcccagtgaccacaggtgttgaggttgcgactattgacagctttcaaggccgtgaa
gcagatgcagtgatcatatcaatggttcgttcaaacaatatgggagccgtggggttcttg
ggtgacagccgaagaatgaatgttgccataacaagagcgcgcaaacatgtagcagtggtg
tgtgacagctccaccatatgccacaacacctttttggcgaggttgctgcgccatattaga
tactctggtaaagtgaagaacgcagaacctggcagttttggaggatttggccttggcatg
gatcccatgttgcctactgcaagttga
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