Ipomoea triloba (trilobed morning glory): 116013582
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Entry
116013582 CDS
T07384
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3
KO
K21444
poly(rC)-binding protein 3/4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116013582
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116013582
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-GeneID:
116013582
NCBI-ProteinID:
XP_031109279
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All DBs
Position
3:complement(22571040..22576070)
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AA seq
678 aa
AA seq
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MDRSRSKRYYYDQDYDSDNLPRTKQRYNQHSNHHYAPQSNHHRRLASGGGGGGRKMQDSS
LMVTTTYRILCHDVKAGGVIGKSGSIIKAIRQHTGAWINVHELMQGDEERIIEISDTRRR
DPEGRMPSFSPAQEALFLIHERILESDAAFNAGFGGSGGGGSGDDEEEYGMRSGAGGGSN
RVVTRLVVSRMHVGSLLGKGGKIIEQMRIETKTHIRILPRDHTLPRCVAMSEEIVQVTGE
MNSVKNAIAIISSRLRESQHRDRSHFHGRAHSPERFFPPNDDFVPPMNNLGRRASVDGPN
FGSRLSGGFNSSRGNSNSSRTSGYSMESGGGPFTDNAQLIAGELLVFRILCPVDKVDTII
GESDGIIELLQNDIGVEVEIIDPVAGSDEHIIIVSSDEGPDDELFPAQEALLHIQTAIVD
LVPEKENIVTTRLVVQSDEVGCLGGRDGALSDIQKMSGADVHILPKEELPSCLSDTDEIV
QIVGEIKAAREALIEVTTRLRSYTYRELFQKETPPPISAPSPMGNLSGAETASLNSNSLS
QENHTVTDPAASIHQNGPTIPTHHSLKDAGAPVSEIAKQNDSERLKDMPSGLNRIPVPLV
TRSTLEVVIPPHAAPKLITKSRNKLAQISELSGATVKLIEDRPEVTEKIIQISGTPDQAE
RAQSLLQGFILSTQEDGL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggatagatcaagatctaagaggtattactacgaccaggactacgattccgataaccta
cccagaacaaaacagaggtataatcagcatagcaaccaccattacgcgccgcagtccaac
caccaccgccgattggcttctggcggcggcggcggtggtcggaaaatgcaggactcttcg
ctcatggtgactaccacttacaggatcttgtgtcacgatgtgaaggccgggggcgtgatt
gggaagtccgggagcattattaaggcgattaggcagcacacaggggcttggattaacgtg
catgagttgatgcagggggatgaggagcgaatcatcgagatttccgatactcggaggcgg
gaccctgagggacgaatgccgtcgttctcgccggcccaggaggccctgttcttgatacac
gaacggattctggagagtgatgctgctttcaatgcggggtttgggggtagtggtggtggt
ggtagtggggacgatgaggaggagtacggaatgaggagtggcgccggcggcgggtctaac
cgggtggtgactagactggtggtttcgagaatgcatgtgggaagtttacttggaaaagga
gggaaaattattgagcaaatgaggattgagactaagacccatattaggattttgcccaga
gatcacactttacctcgctgtgtagcaatgtctgaggagatcgttcaggttactggtgaa
atgaatagtgtaaaaaatgctattgcaatcatttcctcacgcctgagggagagccaacac
cgtgatcgcagtcatttccatggcagggcgcattcgccggaacgattttttcctccgaat
gatgattttgttcctcccatgaacaatttgggacgcagagcgtctgttgatgggcctaac
tttggttcaagattatctggtggtttcaacagttcccggggtaatagtaattcctcacgc
acttctgggtattccatggaatcaggtggtggtcctttcactgacaatgcacagttgatt
gctggtgaactcctagtttttcgaattctatgtccagttgataaggttgatactattatt
ggggagtcagatggcattatagaattgctacagaatgatatcggtgtggaagttgagatt
attgatcctgttgctggctcagatgaacatattattatcgtatcgtctgatgagggtcct
gatgatgagctctttcctgctcaagaagctctgttgcatatacaaactgccattgttgat
cttgttccagaaaaggaaaacattgtcacaacccggttagttgtgcaatcagatgaagtt
ggatgcttaggagggagagatggtgcattgtctgacatacagaaaatgagtggtgcagat
gtacatattcttccaaaggaagaacttccatcatgtctatccgacactgatgagattgta
cagattgttggcgagataaaagcagctagagaagcacttattgaggtgacaacaaggcta
aggagttacacttatcgagaactcttccagaaagagacaccacctccaatatctgctccc
agccctatggggaatttaagtggagctgagacagcttctttgaacagcaattctctgtct
caagaaaatcatactgtaactgaccctgctgcttcaattcatcaaaatggaccaactata
ccaacacatcattcattaaaggatgctggagcccctgtgagcgagatagcaaagcaaaat
gacagtgagcgtcttaaagatatgccaagtggattgaatagaatacctgtaccattggtc
actaggagtacattggaagttgtcattccaccacatgcagctccaaaactaataaccaaa
tcaagaaacaagcttgctcagatcagtgagttgtcaggagctactgtaaaattgattgaa
gatagaccggaagtaacagagaagattatccaaatatcgggtacacccgatcaagctgaa
agagctcagagcttgcttcaaggatttattttaagtactcaagaagacggcctctga
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