Ipomoea triloba (trilobed morning glory): 116013706
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Entry
116013706 CDS
T07384
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
116013706
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
116013706
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
Motif
Other DBs
NCBI-GeneID:
116013706
NCBI-ProteinID:
XP_031109461
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Position
3:complement(2704711..2709350)
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AA seq
673 aa
AA seq
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MASKTTGADVRLWWFSIVVYYLLLFASSVNAARSTPGSDSQEMKLSTPLRLQITDKQVVM
ENGFITVTLSNPNGGIAGIQCQGISNVLEYGLKETNRGYWDIMWSMPGTSTSNFDTLPAT
QFSVITADQNQIEVSFTKTYNPNDSSSVPMNFDKRYVMLPGRSGFYTYAIYDHPEGWPDV
DIGETRLAVKLQRKLFNYMAISDEIQRVMPSDQDRSTGDPLDYKEAVLLTKPSNPSLKGE
VDDKYQYSLENKDIKVHGWVCPNPHVGFWIITGGDEFRSGGPIKQDLTSHVGPTALSVFF
SGHYAGNDYSISLRNGEAWKKVFGPVFIYLNSDQGTDPKSLWENAKQQMVLETKSWPYDF
PMSEDYPSATQRGTVSGQLLIRDRYLSQQLMPAKSAYVGLAPPGLAGSWQEDVKGYQFWT
QTDDNGYFKISAVRPGNYSLYGWAPGILGDYKYNVDVNINPGDEINLGELVFDPPRNGPT
LWEIGIPDRKAAEFFVPDPAPKLMNYALLNHTEKYRQYGLWDRYTAVYPHEDLSYRVGQS
DYRKDWFFAHVNRKVGDTYEPTTWRILFPLENVNATGTYTLQIALASSNFAKIQVWINSD
PGTRMPGFTTSGNGRDNAIARHGSHGLYSLSSFEFPGNMVVNGENTIYLRQPRGGYRFNG
AMYDYIRLEGPSY
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaagactactggagcagatgttcggttatggtggttctctattgttgtttac
tacctcttgctctttgcttcttctgttaacgctgctaggtcaactccgggaagcgacagt
caagagatgaaactatcaaccccgttgagactccaaatcacagataaacaagtggtgatg
gagaatggcttcataacagtcacgttatccaatccaaatggaggaattgcagggattcag
tgccaaggaattagtaatgtactggaatatggtcttaaagaaacaaatagagggtattgg
gatattatgtggagcatgccagggacaagcacgagcaactttgatacgcttccagcaaca
cagttcagcgtaataacagcagaccagaaccaaattgaagtctcctttacaaagacgtac
aatccaaatgattcttcaagtgttcctatgaactttgataagaggtatgtaatgctgcct
ggccgttctggcttctacacctacgccatatacgatcaccctgaaggatggcctgatgta
gacatcggtgaaactcgacttgctgtcaaactgcaaagaaaactgttcaactatatggca
atatcagatgagatacagagagtgatgccgagtgaccaagatcgatcgactggggaccct
cttgactacaaagaagctgttttgctaaccaaaccatccaatcctagcttgaaaggagag
gtggacgacaaataccaatactccttagaaaacaaggatattaaggtacacgggtgggtt
tgccccaatccacatgttgggttttggatcatcacgggaggggatgagttccgctcagga
ggaccaataaaacaagacctcacttcgcatgtcggtccaactgccttatcggtattcttc
agtggtcattatgctggtaacgattatagtattagcttgcgaaatggtgaagcctggaaa
aaggtttttggaccagtttttatttatctaaactctgatcaaggcactgacccaaaaagt
ctctgggaaaatgccaaacaacagatggttttagaaactaaaagttggccttatgatttc
ccaatgtctgaagactatcccagtgccactcaaaggggcacagtttcaggccaactacta
atccgtgataggtatctgagtcaacagcttatgccagcaaaatctgcatatgtgggtctg
gctccaccaggacttgctggatcttggcaagaagatgtcaagggctaccaattttggaca
caaacagacgacaacgggtacttcaagattagtgctgttaggcctggaaactatagtttg
tatggttgggcccccggaatccttggagattacaaatacaacgttgacgttaatatcaat
ccaggagatgaaattaatctgggtgagcttgtctttgatcctccaagaaatggtccaact
ttatgggaaatcggtatccctgatcgaaaggctgcagaattctttgtccctgatcctgcc
ccgaagttaatgaactatgctttactaaatcatactgaaaagtatagacaatatggacta
tgggatcgttatacagctgtatatcctcatgaagatttgtcttacagagttggacaaagt
gattaccgaaaagactggttctttgctcacgtaaacaggaaagttggggacacatatgaa
ccaacgacatggagaattttgttccctctcgagaatgttaacgcgacaggaacctataca
cttcaaatagcgttagcttcttccaattttgcgaaaattcaggtttggattaacagtgat
cctggtacgagaatgcccggattcacaacaagcggaaatggaagggacaatgcaattgcg
agacatggaagtcatgggttgtatagtctatcgagctttgagttcccaggaaatatggtt
gtgaatggagaaaacacaatatatttgaggcagccaagaggaggatatcggttcaatgga
gccatgtatgactacatccgtttggaagggccaagctactga
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