Ipomoea triloba (trilobed morning glory): 116013789
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Entry
116013789 CDS
T07384
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03082
ATP-dependent chromatin remodeling
itr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116013789
03083 Polycomb repressive complex
116013789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
itr03036
]
116013789
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
116013789
Histone modification proteins
HAT complexes
HATB complex
116013789
HDAC complexes
Sin3A-HDAC complex
116013789
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
116013789
PRC2.2
116013789
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
116013789
Heterochromatin formation proteins
Other heterochromatin formation proteins
116013789
Chromatin remodeling factors
NuRD complex
116013789
NuRF complex
116013789
NuRF complex (fruit fly)
116013789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
Beta-prop_HPS5
Beta-prop_DCAF12
EIF3I
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
eIF2A
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
116013789
NCBI-ProteinID:
XP_031109576
LinkDB
All DBs
Position
3:16878905..16886814
Genome browser
AA seq
492 aa
AA seq
DB search
METPQQPPRRRGRPKGSSAKSKEDRDREQPHSAAAAATPRMRGPAADKKAAAAAADEKYA
QWKSLVPVLYDWFANHNLVWPSLSCRWGPVVEQHSHKNRQRLYLSEQTDQSVPNTLIVAN
CDVVRPRIAADSHISHFNEESRSPYVKKYKTIIHPGEVNRIRELPQNKNIVATHTDSPEV
LIWDVEAQPNRHAVLGAVASRPDLTLIGHSENAEFALAMCPTEPFVLSGGKDKSVVLWSI
QDHISTLSTDAQKPAGSSIKAADNPSIQARGIFQGHEDTVEDVQFCPSSSQEFCSVGDDS
CLILWDARVCTSPVVKVEKAHNADLHCVDWNPHDGNFIITGSADNSVRLFDRRSLTSNGV
GSPVHIFENHKAAVLCVQWCPDRSSVFGSTAEDGRLNIWDYDKVGEKDNETPAPGLFFQH
AGHRDKIVDFHWNVADPWTIVSVSDDCDSTGGGGTLQIWRMLDLLYRPEEEALAELQKFK
DHVSKCAPKSDS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcctcagcagccgccgaggaggcgcggccgtccgaagggatcttctgccaag
tccaaggaggacagagatcgcgagcagccgcactccgccgccgccgccgccactcccagg
atgagaggacctgcagctgacaagaaggccgccgctgccgccgctgacgagaagtacgcg
cagtggaagtcgctcgttcccgtcctctatgactggtttgctaatcataacctcgtctgg
ccgtcgctgtcctgccgatggggtcctgtggttgagcagcacagtcacaaaaaccgccaa
cgactttatctttcagaacagacagatcaatcagtgccaaacactttgattgtagccaac
tgtgatgtggttcgacccaggattgcagcggacagtcacatatcacacttcaatgaagaa
tcacgctcaccttatgtcaagaagtacaaaaccattatacacccaggggaggttaacaga
atcagagagcttcctcaaaataaaaacatagtggcaacccatactgatagtcctgaagtt
ctaatttgggatgtggaagcccaacccaatcgacatgctgttcttggagctgttgcttca
cgcccagatttgacattgattggacatagtgagaatgcagaatttgcattggcaatgtgc
cccactgaaccctttgtgctctctggaggaaaggacaaatctgtggtactgtggagtatt
caagatcatatatcaacattgagcacagatgcacaaaaacctgctggttcatctattaag
gcagctgataatccctctattcaagctcgtggaatcttccaaggccatgaggataccgtt
gaagatgttcagttctgcccatcaagttcacaggaattctgtagtgttggtgatgactca
tgtctcattctctgggatgctcgagtttgtactagtccagttgtaaaggttgaaaaagct
cataatgctgatctccactgtgttgactggaatcctcatgatggcaactttattatcact
ggatctgcagataattctgtccgcttgtttgatcgacgtagtttaacttcgaatggagtt
ggctcaccagtccatatctttgaaaatcacaaagcagcagttctttgtgtgcagtggtgt
ccagacaggtcctctgtatttgggagtactgcagaggatggtcgtttgaatatttgggat
tatgataaggttggtgagaaggacaatgagacacctgctccaggtttatttttccagcat
gctgggcacagggataaaattgttgacttccactggaatgtggctgatccatggacaatt
gtaagtgtatctgatgactgtgactccacaggtggaggtggcacactacagatatggcgg
atgttggatttgctgtatcgtcctgaagaggaggctctggccgagcttcaaaaattcaaa
gaccatgtaagcaagtgcgctccaaaatctgattcctaa
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integrated database retrieval system
