Ipomoea triloba (trilobed morning glory): 116013861
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Entry
116013861 CDS
T07384
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116013861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116013861
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116013861
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
116013861
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
zf-RING_UBOX
DUF7567
Motif
Other DBs
NCBI-GeneID:
116013861
NCBI-ProteinID:
XP_031109677
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All DBs
Position
3:complement(22440670..22444782)
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AA seq
318 aa
AA seq
DB search
MEIDSIECVSSSDGMEDEVTQSSLASHHPYSSSAKPQINILPAGIAPTSVHELLECPVCT
NSMYPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKYFSLG
CTEIFPYYSKLKHEAVCNFRPYSCPYAGSECSVTGDIPYLVSHLRDDHKVDMHTGCTFNH
RYVKSNPREVENATWMLTVFHCFGEYFCLHFEAFQLGMAPVYMAFLRFMGDETEARSYSY
SLEVGGNGRKLIWDGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRI
WKEQQNPDAGVCIPNLCS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgatagcattgagtgcgtgtcctcatcggacggcatggaggacgaagtgacc
caatcgtctctagcctctcatcatccttacagctcttcagcgaagcctcagattaacatt
ttacctgccggaattgcgcctaccagtgttcatgaattgctggagtgccccgtttgtacc
aattctatgtacccgcccattcatcagtgtcaaaatggccacacgctgtgttcaacctgt
aaggcaagggtgcacaaccgatgtcctacttgcagacaagagctcggtgatattaggtgc
ttagctttagaaaaggttgcagagtcacttgaacttccctgcaaatatttttcattggga
tgtacagaaatatttccatattacagcaaacttaaacatgaggcggtttgcaattttaga
ccgtacagttgcccatatgctggatcggagtgctcagttactggggacataccttatttg
gtttctcatttaagagatgaccacaaggttgacatgcacacaggatgcacattcaaccat
cgatatgttaagtctaatcctcgtgaagtagaaaatgccacatggatgctgactgttttt
cattgttttggtgagtacttctgccttcacttcgaggccttccagcttggcatggctccc
gtatacatggcttttcttcgctttatgggagacgaaactgaagctcgctcatacagctac
agcctggaggtaggaggaaatggtagaaagctcatctgggacggtactccaagaagtatc
cgagatagccatcgcaaggtgagggacagtcacgacggtcttatcattcagcgtaacatg
gcacttttcttttccggcggggaccgcaaggagctgaagcttagagttacagggaggata
tggaaggaacagcaaaatccagatgctggggtgtgcattcccaatctctgtagctaa
DBGET
integrated database retrieval system
