Ipomoea triloba (trilobed morning glory): 116013865
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Entry
116013865 CDS
T07384
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
itr03036
]
116013865
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
116013865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
zf-PHD-like
PHD_2
zf-RING_11
IFRD
INTS1_R4
zf-RING_2
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
116013865
NCBI-ProteinID:
XP_031109682
LinkDB
All DBs
Position
3:complement(998089..1011767)
Genome browser
AA seq
1780 aa
AA seq
DB search
MASSSASGGIPRGIALPNTVHSEVVPCLPLPSLPVCCGAVEQELRLSSEQSEPRSLNRGE
VLSQASRIADLLQSTDVSYLNLRADVAPQPCGFIGHVDLYDEVLRCNSEAFDCRAPGPIK
EPVRVHKSSEVKPFESRPIFEQPQRDVLEIHYNQHEYVANDATTPSRKLRGKKKANDEIL
MASSSDASAHQDALVTGFQKMLEDLCVKAKVNDDERDETEWLPLSVGDLRGLVNDIMTLR
AKKVLHLIQVDILVAVLKVLDQQIHRAEGLSVNECEYPDSETVSTIYSALESVHASLAIM
AYNGMPKQLYKEEIIERILDFSRHQVIDVMLASDPVYRALHRPMENGVVEGEDDEEVYGE
FGSASKKKRPARTVKIRKTASNKVSAAVNNILQKLCVILGFVKDLCAIERLSDSCVLQLV
KTCFTTFSVDNIHLLQLKAISLISGIFYVYSNHRAYMMDETLQVLLKLPSSKRIPRTYHL
PEEDHKQIQIVTALLLQLVHSSSNLPEVLKQTLSNISLEVPLDASCPTKCYESVTDACCL
FWSRVLQRLTNSKSQEASELKMVMENIVMDLLVTLNLPEYPASAPLLEVLCVLLLQNAGL
KSKDVAIRSMAIDLLGTIAARLKQDAVRVQDETFWIVKELVSGDINDSNFPRDACSVCLD
TRNEKSLVLCRGCERVFHVDCIGVRKHELSNRNFHCQMCLSKKQLLALKSHCESQGMDGS
KSKRESEKPSQASDSITNLETIQMLLLTYLQEADSGDDSNIFTRWFYLCLWYKDDPGSEE
KFYYYISKLNSKAILRDSGSFASLMTRDSVKKITSALGQNNSFSRGFDKILQVLLASLRE
NSPVIRAKALRAVSIIVEADPEVLYDKLVQTAVEGRFCDSAISVREAALELVGRYIASHP
DVGLKYFVKVAERVKDTGVSVRKRAIKIIRDMCTSNSNFSEFSTACIEIISRVNDEESSV
QDLVCKTFYDFWFDESSGSHSQFYGDGSSVPIEVSKKTEQIVDMMRRMPTHQPLVTVIKR
NLALDFFPQSAKAAGINPVSLASVRRRCELMCKCLLEKILQVAEMNYGGEARMLPYMLLL
HAFCVVDPTLCAPSSDPSRFVVTLQPYLKSQADNRVAAQLLESIIFVIDSVLPLLRKLPQ
SVIEELEQDLKQMIVRHSFLTVVHACIKCLCSVSKVAGKGATVVEYLVQLFYRRLDSLGF
ALDNKQQVGRSLFCLGLLIRYGSTLLSASQHSNSVNLASSLDVFKKYLQADDFVIKVRSL
QALGYVLIARPDFMLRDDMGKILEATLSASTDTRLKMQALQNMYEYLLDAESQMGAADTT
VENDVNNSDSSHCVPVAAGAGDTNICGGIVQFYWDKILGRSLDANEQVRQSAIKIVEIVL
RQGLVHPITCVPYLIALETDPEEQNSKLAHHLLMNMNEKYPAFFENRLGDGLRMSFQFMQ
AMSKGGSDNQYAKANFKAPGNVPAKSDTGSFTYSRLGVSRIYKLIRGNRVSRNKFMASVV
RKYDTPSWDDAVIPFLIYCTEILALLPFTLPDEPLYLIHTINRVIQVRAGNVEANLKAFL
HFLQGSEQNINGNGSILNGAAQSAMYQTRAVVDNEVMRDESTAYQGCEFRVSSDSNANHM
PSVNPHDLSNDVVQKVQADFLQAGALQLLLRLKRHLKIIYGLNDARCQAYSPGEPQKPGE
VLSRQNIPFNVSDIRIDPPITYEDFTRRYQDFKNAMKEDTVDYSIYTANIKRKRPPPKRG
GRSGRMGGDDYEDDDEDWTGGVRKLNNSGGRRMTRQSLHL
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttcaagtgccagtggcggaatcccccgaggcatagccctccccaacactgtt
cactccgaagtcgtgccgtgtctgccgttgccgtcgctgccagtgtgctgcggggccgtc
gaacaggagctacggctgtcgagtgagcagagcgagccgagatcgttgaatcggggtgag
gtgctcagtcaggctagcaggattgctgacctgcttcagagcactgacgtgtcttatttg
aaccttcgagctgatgtggctcctcaaccttgtggcttcatagggcatgtggatctgtat
gatgaagtccttagatgcaactctgaggcatttgattgcagagctccaggtcctattaag
gagcctgtacgagtgcacaaatcaagtgaagtaaaaccttttgagagcagacctattttc
gaacaaccacagagggacgtcctagaaattcactataaccaacatgaatatgttgctaat
gatgcaactacaccttctagaaaactacgaggaaagaaaaaagcaaacgatgaaattttg
atggcaagcagttctgatgcttctgctcaccaagatgctctagtaacaggcttccaaaag
atgttggaagacctttgtgtgaaggcaaaagtaaatgacgatgagagggatgaaacagaa
tggttaccattgtctgttggtgatcttagagggcttgtaaatgacataatgacccttcga
gctaagaaagtgctacatttgattcaagtagatattcttgtggcagtgttaaaggtgtta
gatcaacagatccatcgagcagaaggtttatctgttaatgaatgtgaatatccagattca
gagactgtatcaactatttatagtgcattggagtctgttcatgcatctttggcaattatg
gcttacaacgggatgcctaagcagctctataaagaggagatcattgagagaatcctggat
ttctctaggcaccaagtcatagatgtgatgctggcttctgatcctgtatatcgagcactg
catagaccaatggagaatggggttgttgaaggtgaagatgatgaggaagtttatggggaa
tttggatcagcatctaagaagaagcggcctgcaaggactgtgaaaataaggaagacagca
tcaaacaaggtatctgctgccgtgaataatatacttcagaagctttgtgtcattcttgga
tttgtcaaggatttgtgtgcaatagagcgcttatcagatagttgcgttcttcaacttgtg
aagacatgcttcacaacattttcggtggataatatacatcttttgcaattgaaagcaatc
agtttgataagtgggatattttacgtgtactcaaatcatcgtgcatacatgatggatgaa
acactccaagttcttctgaagctaccgtcctctaagcgcatacctagaacttatcatctt
cctgaggaagaccataagcagattcagattgtcactgctttgttgcttcagctagtacac
agcagctcaaaccttcctgaagttttaaagcaaacattatccaatatttccctagaagtc
ccacttgatgccagttgccctacaaaatgctacgagtcagttactgacgcttgctgtctt
ttctggagtcgagttcttcagcggttgactaattcaaaaagtcaagaagcatctgagttg
aagatggtgatggagaatatagtcatggatctgttagttactttgaacttaccagaatat
cctgcctctgctcctcttctggaggttctttgtgttttacttcttcaaaatgctgggctg
aaatctaaagatgttgctattcgctcaatggccattgatcttcttggtacaattgctgca
aggttgaaacaagatgcagtgcgtgttcaggatgaaacattttggatagtgaaagagttg
gtttctggggacatcaatgatagcaactttccccgtgatgcatgttctgtttgtttggac
accaggaatgaaaaatcactggttttatgccgtggttgtgagagagtatttcatgttgac
tgcataggagttagaaagcatgaactttctaatcgcaactttcattgtcagatgtgtctc
tctaaaaagcaacttcttgcattgaaatcacactgtgagtcccagggcatggatggcagc
aaaagtaaacgcgagtctgaaaagccttcccaagctagcgattcaattacaaatttggag
accattcagatgctacttctgacttaccttcaagaggctgattctggagatgattcaaat
atttttacccggtggttttatctttgtctatggtacaaagacgatcctggttctgaagag
aagttctactactatatctcaaagttgaattcaaaagcaattttgcgtgattctggctct
tttgcatcactaatgacaagggattcagtaaagaagataacctcggcattgggacaaaat
aattctttctctagaggatttgataagattcttcaagtgcttctggccagtttacgggag
aactcacctgtgatccgtgcaaaggcattgcgagcagtcagcatcattgtagaggccgat
ccagaggttttgtatgataagcttgtccaaactgctgttgaagggaggttttgtgactct
gctatatctgtgagagaagcagccctggaacttgttggtcgatacattgcttcacaccct
gatgttggtttaaagtactttgtgaaagtggcagagagagtaaaggatactggagtaagc
gtgcggaaacgagctattaaaatcatacgggacatgtgcacttcaaattccaacttctca
gagttttctactgcttgtattgagattatttcccgtgttaatgatgaagaatcgagtgtg
caggatctcgtgtgcaagacattttatgacttctggttcgatgaatcttctggttcacat
agtcagttttatggagatggcagttctgttccaattgaggtgtctaagaaaactgagcaa
attgttgacatgatgagaaggatgccaacccatcaacctcttgtaactgtgattaaacgt
aacttagccctcgatttctttccacagtcggctaaagctgcgggtatcaaccctgtatca
cttgcttcagttcgtaggcgttgtgagcttatgtgcaagtgcttgttggagaaaatactg
caggtggcagaaatgaattatggaggagaggctcgaatgcttccatatatgctgctgttg
catgccttttgtgttgtggatcccactctttgcgcaccatcttcagatccttctagattt
gtggtcacactgcagccttacttgaagagtcaggctgacaaccgagtagctgcccaactt
ctggagagtataatctttgtaattgattctgttttgcctttgctacggaagcttcctcaa
agtgttattgaagaacttgaacaagatctgaagcaaatgattgttcggcattctttctta
actgttgtccatgcttgcatcaagtgcctctgctctgtaagtaaagtagcaggaaaaggt
gcaacagttgttgaatatcttgttcagttattctacagacgtttggatagccttggtttt
gctcttgataataagcagcaagttggtcgatctctcttctgtttgggcttgctaatacgt
tatggtagcactttactgagtgcatcccaacacagcaatagcgtaaatttggcaagcagc
ctggatgtgtttaaaaaatatctacaagctgatgattttgtgatcaaggttaggtcttta
caggcactgggatatgttttgatcgcccggcctgattttatgctgagagatgacatgggg
aaaattttggaggcaacactttctgctagcacggatacccgtctcaagatgcaagcattg
caaaacatgtacgaatatcttcttgacgcggaaagtcaaatgggagcagcagatacaact
gttgaaaatgatgttaataactcagacagtagtcattgtgtacctgtagctgcaggtgct
ggtgataccaacatttgtggaggcatagttcagttctattgggacaaaatcttaggaagg
tctttagatgcaaatgaacaagtacggcagtctgctattaagattgtagagattgtattg
cgtcaaggtctagttcatcccatcacttgtgttccttaccttatagcccttgaaacagat
ccagaagaacagaattcaaagctagcgcatcatttgttgatgaacatgaatgaaaaatat
ccagcctttttcgaaaaccgccttggggatgggcttcgaatgtctttccagttcatgcaa
gccatgagtaaaggtggatctgacaatcaatatgccaaagccaattttaaagctcctgga
aatgtaccagcaaaatcagatactggctcatttacatattcaaggcttggtgtttcgcga
atttacaaactcatccgtgggaatcgtgtttcaagaaacaaatttatggcatcagttgtg
cgcaaatatgatacaccaagctgggatgatgcagttatcccttttttgatatactgtact
gaaattctggcactgctaccttttacattgcctgatgaaccgctttatttgatccatacc
ataaaccgtgttatccaagtcagagctggaaatgtggaggcaaatctgaaggcttttctt
cattttctgcaaggaagtgaacagaacataaatggaaatgggagcattctaaatggggca
gctcagtctgctatgtatcagactagagcggttgttgacaatgaggttatgcgggatgag
tcgactgcttatcagggatgtgaatttcgtgtgtcatcggattcaaatgcaaatcatatg
ccttcagtaaatccacatgacttatcaaatgatgttgtgcagaaagttcaggcggatttt
ctgcaagcgggtgcactacaactgcttctgaggcttaagaggcacctgaagattatttat
ggactgaatgatgctcgttgccaggcatattctcccggtgaacctcagaaacctggagaa
gtcctttctaggcagaatattcccttcaatgtgagtgacataagaattgatcccccaatt
acatacgaagacttcacgaggcgataccaggactttaagaatgcaatgaaagaagacaca
gttgactattcaatctacacagcaaatatcaaaaggaaacgtccaccaccaaaaagaggt
gggagatctggacgaatgggtggggatgattatgaagatgatgatgaggattggacaggt
ggggtacggaagttaaataacagcgggggcagaagaatgactaggcagagcctgcacttg
taa
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