Ipomoea triloba (trilobed morning glory): 116014016
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Entry
116014016 CDS
T07384
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116014016
04121 Ubiquitin system [BR:
itr04121
]
116014016
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116014016
Membrane trafficking [BR:
itr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116014016
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116014016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Rad50_zn_hook
zf-Nse
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
116014016
NCBI-ProteinID:
XP_031109858
LinkDB
All DBs
Position
3:15252175..15254264
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AA seq
374 aa
AA seq
DB search
MSMPSTYWCYRCNRFVRVWSQGSVACPDCNSGFVEEIDNSNRSSALDSQRRRFPSSAMFM
MRNLDRSSGSGSGSSPRLRRSRRNGWDRSPFNPVIVLRGPSDGGGEGGGGGRGFELYYDD
EAGAGLRPLPASMSEFLLGSGFDRLLDQLTQIEANGIGGIENPPASKAAIESMPTIEIAD
SHISTESHCAVCTEPFEVGNDAREMPCKHLFHSDCILPWLSMRNSCPVCRHELPPDTRNP
SDSIRPSSDPQNDEETVGLTIWRLPGGGFAVGRFSGTRRGGEREFPLVYTEMDGGFNNNG
VPRRIPWGSRGSQSQQNGGFRRAFFNLFACFGRVGSSHSNSSLGSRITRRSSSSLSTRRR
RGWSFGANDEPQRW
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgccttcaacgtattggtgttatagatgcaataggtttgtgagggtttggagc
cagggttcggtggcgtgtccggattgtaacagcgggtttgtggaggaaatcgacaattcg
aaccgatcctccgccttggattctcagcggcggcgttttccgtcgtcggcgatgttcatg
atgcggaatttggatcggagctccgggtcgggttccgggtcgagtccgcggctccggagg
agccgaaggaatggttgggaccgttcgccgtttaatccagtgattgttctccgagggccg
tcggacggcggcggcgaagggggtgggggagggagggggtttgagttgtactatgacgac
gaggcgggggcgggattgaggccgttgccggcgagtatgtcggaatttttactcgggtcg
ggtttcgaccggttgttggatcagttgacccaaattgaggcgaacggaatcggagggatc
gagaatccgccggcgtcgaaagcggcgatcgagtcaatgccgacgatcgagatcgccgat
tcccacatctccaccgaatctcactgcgccgtttgcacggagcccttcgaggtcggaaac
gacgctcgcgaaatgccctgtaagcatctattccattccgattgcattctcccctggctt
tccatgcgtaattcctgccctgtttgtagacacgaattgcccccagacactagaaaccct
agcgactccattaggccctcatcagatccccaaaacgacgaagaaactgtagggttaaca
atttggaggctccccggcggcggtttcgccgtggggcgcttttccgggactagaagaggc
ggggaaagagagttccccttagtctacactgaaatggacggtggattcaacaacaatgga
gttcccaggagaatcccctggggctctaggggcagtcaatcacagcaaaatggcggtttc
agaagagctttctttaacctattcgcgtgtttcggtagagttggctcatcacattccaat
tctagtttaggttctaggataactcgaaggagtagtagttcactctcgacaagaaggcgc
aggggctggagtttcggggcgaatgatgaacctcaaagatggtga
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