Ipomoea triloba (trilobed morning glory): 116014049
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Entry
116014049 CDS
T07384
Name
(RefSeq) rab escort protein 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
itr01006
]
116014049
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116014049
Prenyltransferases [BR:
itr01006
]
Protein prenylation
Rab geranylgeranyltransferase
116014049
Membrane trafficking [BR:
itr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116014049
Endosome - Lysosome transport
Rab GTPases and associated proteins
116014049
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
Motif
Other DBs
NCBI-GeneID:
116014049
NCBI-ProteinID:
XP_031109895
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Position
3:4213786..4218566
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AA seq
646 aa
AA seq
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MAMDDPTSYPPIEPSNFDLIVIGTGLPESIVAAAASAAGKSVLHLDSNSFYGSHYASLPL
DDFTSFLQSHSNSASIPAPSQPHDESDYDLVPLCTRQVYSSIDVSAHSTEPLEHSRKFCI
DLAGPRVLLCADDMINLILKTDINQYMEFKSVDASFICDGDGNLANVPDSRSAIFKDRSL
SFPEKNQLMRFFKLVQGHLGGDDTESNKISEEDLECPFYEFLNRMGLSSKLKSIILYAIT
MATYDQENVDACKDVLKTRDGINHLALYHSSVGRFSNAPGAMIYPIYGQGELSQAFCRRA
AVKGCIYVLRMPVHFLLKDKGSGNYKGVKLSSGQELFSHNLILAPSFVIPSAMVDSSAHC
LQDGSFDFGREDVKEKLVKGICITKCSLKPDVANCLVFFPPGSLFPDQVTSIRVFQLSSN
VAVCPSGMFVTYLSVICDDAVQGKKLLEAAINALFSIPVSGVPESNSADNPNSNTKPDLL
WSALYVQELIKDSFDSFISVSMPDWKLHYSDLLSASVKIFQKIYPNEEFFPKAAPTKEHK
DDGVSELEPSAEDVPELEPSAEDVPELEPSAEDVPELKPKPSVEDVPELKPSADGVPELE
PSAEGVPVDGGVAEPKPSADGVPELEPSAVGVPELKSSAEGDPVGT
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggatgaccccacatcgtatccgcccatcgaaccctctaacttcgatctaatc
gtaatcggcaccggtctaccggaatccatcgtcgcggcggccgcctctgccgccggaaaa
tccgtcctccacctcgactccaactccttctacggcagtcattacgcttctctccccctc
gacgacttcacttcctttctgcaatcccattctaactccgcctccattcccgctccttcc
cagccccacgatgaatccgattatgatctcgtgcctctttgtactcgccaggtctactcc
tccatcgatgtctccgcgcactctaccgaacctctggagcactcgcgaaaattctgcatc
gatttggctggacctagggttctgttatgcgccgatgatatgatcaatctcattttgaag
acggacatcaatcagtacatggagttcaagtctgtggacgcgagctttatttgtgatgga
gacggcaatttggccaatgtgccggattcgcgcagtgcgattttcaaggaccgtagcttg
agctttcctgagaagaatcagttgatgaggttcttcaagctggtgcaggggcatttgggg
ggcgatgacactgaaagtaacaagatatccgaggaggatctggaatgtccgttttatgaa
ttcctcaacagaatggggctttcgtccaagctaaaatcgattatactctatgcaataacc
atggcaacgtatgatcaggaaaatgtggatgcctgtaaagatgttctcaagacaagggac
gggataaaccatttagctctttatcactcttcagttggcaggttttctaatgcccctggc
gctatgatttacccaatctatggtcaaggggaactttcacaagccttttgccgtcgtgct
gctgtgaaaggctgtatatatgttcttcggatgcctgtccattttcttctcaaggacaag
ggcagtggaaattataagggtgtcaaattgtcttctggacaagaattgtttagccataat
ctgatattagctccatcatttgtaattccctctgctatggttgattcttctgctcattgt
ctgcaagatggttcttttgattttggtagagaagatgtaaaagagaagctggttaaggga
atatgcattacaaaatgctcattaaaaccagatgtggcaaactgcttggtgttctttcct
cccggatctttgttccctgaccaggtgacttcaatccgtgtcttccagttaagcagcaat
gttgcagtttgcccctctggaatgtttgtgacttacctttcagttatatgtgatgatgct
gtgcaagggaagaaattactggaggcagccattaatgcattgttctctattcctgtttct
ggagttcctgaaagtaactctgcagataatccaaattcaaatacgaagcctgatttactt
tggagtgcgttgtatgtacaggagctgataaaggattcatttgattccttcatatctgtc
tctatgcctgactggaagctgcattacagtgatcttttgtctgcatcagtgaagatattt
caaaaaatataccctaatgaagaattctttccaaaagctgcacccaccaaggagcacaag
gatgatggtgtgtctgagctcgagccttcagctgaagatgtgcccgagctcgagccttca
gctgaagatgtgcccgagctcgagccttcggctgaagatgtgcccgagctcaagcccaag
ccttcggttgaagatgtgcccgagctcaagccttcggctgatggtgtgcccgagcttgag
ccttcggctgaaggtgtgcctgtggatggtggtgtggccgagcccaagccttcggcagat
ggtgtgcccgagctcgagccttcggctgtaggtgtgcctgagctcaagtcttcggctgaa
ggtgatcctgttgggacgtag
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