Ipomoea triloba (trilobed morning glory): 116014148
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Entry
116014148 CDS
T07384
Name
(RefSeq) ABC transporter B family member 28 isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116014148
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
itr02000
]
116014148
Transporters [BR:
itr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
116014148
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_22
AAA_29
AAA_30
AAA_5
AAA_16
RsgA_GTPase
AAA_28
AAA_25
Rad17
AAA_33
AAA_15
Zeta_toxin
SRP54
Motif
Other DBs
NCBI-GeneID:
116014148
NCBI-ProteinID:
XP_031110011
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All DBs
Position
3:13623488..13629063
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AA seq
715 aa
AA seq
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MAAAAAASFTLPFRPFTPPKHRRQPHLLAAHLNHYSRFRVSSLASPRVLARCQNPKRLVI
SSAYAGPAIDAFVSENELKFEDSGDNFVAQPIEVINWGLLWKLLSDHKLQLAASVLTLVG
CTTCTLTMPLLSGRFFEVLIGARPEPLWKVLGRVAVMYSLEPIFTVIFVVNMNAMWEKVM
SSLRAQIFQRVLIQKVEFFDRYKVGELTALLTSDLGSLKNIVSENVSRDRGFRALSEIIG
TLCLLFALSPQLAPILGVLMLSVSVLVALYKRSTVKVFKSHGLVQASIADCVTETLSAIR
TVRSFGGEKRQMSVFARQVLEYEDSGIKLGIFKSVNESVTRVAVYVSLMALYCLGGSKVK
AGELSVGTVASFIGYTFTLTFAVQGLVNTFGDLRVAFASVDRINSVLSGAEIDEALAYAL
HKDMKQKNAHDKNFSLFVVNGSDGMRSTNLGYMSSLKSGSSVRSLAQSGDICLEDVHFSY
PVRPDVEILSGLNLTLKCGTVTALVGPSGAGKSTVVQLLARFYEPTKGRITVAGEDLRTF
DKSEWARAVSLVNQEPVLFSVSVGENIAYGLPDKDVSKDDVIKAAKAANAHEFIVSLPQG
YDTLVGERGGLLSGGQRQRIAIARALLKDAPILILDEATSALDTVSERLVQDALNHLMKG
RTTLVIAHRLSTVQNADEIAVCSDGKIAELGTHFELLESKGQYASLVASQRLAFE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgctgccgccgcctccttcactcttcctttccgcccctttacgccgccaaaa
caccgccgacagccccacttgcttgcggcgcatctaaatcattactcgcgctttcgcgtt
tcatcgctagcctcaccgcgtgtactagctcgttgccagaacccgaagcggttagtcata
tcctccgcttatgccggccccgctattgacgcttttgtatccgaaaacgagcttaaattc
gaagattccggcgataattttgttgcccagccgattgaagtcatcaattggggattatta
tggaagcttctgtctgaccacaagctgcagcttgccgcttctgttctcaccctcgttggc
tgcactacctgcactctcactatgcctctactctctgggcgattttttgaagtacttata
ggggcgagacctgagcctctgtggaaagttctcggtagagtggctgttatgtactcattg
gagccaattttcactgtgatttttgttgtaaacatgaatgccatgtgggaaaaggttatg
tccagtttaagagcgcaaatatttcaaagagtattgattcagaaggttgagttctttgac
cgctacaaggttggtgaactaacagcattattgacatctgatttgggctcattgaagaat
atcgtgagtgaaaatgtttccagggatcgtggttttagggcattgtctgagattattgga
acactgtgtttattgtttgccctatctccccaactggcaccaattttgggcgtactgatg
cttagtgtgtcagttttagttgctctatacaagaggtcaaccgtgaaagttttcaaatct
catggtttggtccaagcttcaattgctgattgtgtaactgagacattgtctgccattcgc
actgtacgatcatttggtggagaaaagcgtcaaatgtcagtctttgcacggcaggttctt
gagtatgaggacagtggcataaagcttgggattttcaaatctgtaaatgagtctgtaact
agggttgcagtttatgtctctttgatggccttatattgtcttggggggagcaaagtaaaa
gctggcgaactatccgtgggaactgtggcttcttttattggatacacgtttaccttgact
tttgcagttcaagggcttgtcaatacctttggagatcttcgtgtggcttttgcctctgtg
gatagaatcaattctgtgttgtctggagctgaaattgatgaagcccttgcttatgcctta
cacaaggacatgaaacagaagaatgcacatgataaaaattttagtctatttgtggttaat
ggttctgatggcatgcggtctacaaatttgggatacatgtcatccttgaaatctggtagt
agtgtgcgaagccttgcacagtctggcgatatttgtcttgaagatgtacatttttcttat
ccagtgaggcctgatgtagaaatccttagtggtctgaatttgaccctaaaatgtgggaca
gttactgccctagtgggccccagtggcgctgggaaaagtactgtagtacagctactagca
cggttctatgagccaaccaagggtcgcattactgttgcaggagaagatttgcgaacattt
gataagagtgaatgggcacgtgctgtgtctctagtgaatcaagaacctgttcttttctcg
gtatctgttggggagaatattgcatatggcctcccagataaggatgtatccaaggatgat
gtgataaaggcagcaaaagctgcaaatgctcatgaattcatagtttcattgccacagggt
tacgatacattggttggtgagcgtgggggattgttaagtggtggacagaggcagaggatt
gccattgccagagctttgctcaaggatgccccaatcctaattcttgatgaggccactagt
gcattggatactgttagtgagcgtctagtccaggatgcgttgaaccatttaatgaaggga
aggacaacattagtgattgctcatagattgagcactgttcagaatgcagatgagattgct
gtttgttctgatggaaagattgcagagctggggacacattttgagttgttggaaagcaag
ggtcaatatgcttctctcgtcgcctctcagagacttgctttcgagtga
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