Ipomoea triloba (trilobed morning glory): 116014243
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Entry
116014243 CDS
T07384
Name
(RefSeq) WD repeat-containing protein 76-like
KO
K24755
WD repeat-containing protein 76
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116014243
03036 Chromosome and associated proteins [BR:
itr03036
]
116014243
03400 DNA repair and recombination proteins [BR:
itr03400
]
116014243
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116014243
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116014243
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
116014243
DSBR (double strand breaks repair)
Other DSBR factors
Others
116014243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_HPS5
EIF3E_C
Motif
Other DBs
NCBI-GeneID:
116014243
NCBI-ProteinID:
XP_031110120
LinkDB
All DBs
Position
3:20628233..20631654
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AA seq
476 aa
AA seq
DB search
MAPSQKLTDYERRKLENIKRNEEMLAALKIHSRLSDLSAATKRPRVQNRSYKLSPEKKQK
SETPIVLRRSLRKQGKPPDDSVADGLKVDYDESIKKNKLRLQSSLKKLPTKPVPINMKDA
FSGENNGSNQQLIETIKGLSRKSQLDENVNQEPIFCDLKKKRRPSGSVDIESLRLEPENI
ARVVRGRILNAKCFPTNGMRMVAVGNMFGDIGFWNADAKEEDGDGIYLYQPHSAPVSGIV
IESFSMPKMYTCCHDGFIRLMDIEKELFDSLYFSDYPICALSQRPDDMNSLYYAEGNGKL
GIWDLRAGKSSSSWSLHEDRINSIDFNLADNYMLATSSTDGTACIWDMRNAGAMKPRSLR
TVHHKRAVCSAYFSRSGRFLATTSYDDKIGFSCGANYEAVCMLRHQNNHSFRAIWGWDDS
YVFIGNLQRGVDVISTYKMRTVSVSAIQWRLDAHQYEVGMLAGATGGGQVCLWTPS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttctcagaaattaacggattacgaacgtcggaagctggaaaacatcaagcga
aatgaggaaatgctcgccgccctcaaaattcattcccgcctctccgatctctccgccgcc
accaaacgtcccagagtgcagaataggtcttataaattgagtccagagaagaaacagaaa
tctgagactcccattgtgcttagacgttctctaaggaaacaaggaaagccgccagatgat
tctgtagctgatggtctaaaagttgattatgatgagtccataaaaaagaataaactacgg
ttacagtcctcactcaaaaaattgcctacaaaacctgtgcctatcaatatgaaagatgca
tttagtggtgagaataatggctccaaccaacagttaattgaaacaatcaagggtttgtca
agaaaatcccaattagatgaaaatgttaatcaagaacccatattttgtgatcttaagaag
aaacgaaggccttcaggttcagtagatattgagtcattgagattggaaccagaaaatata
gcacgggttgtgcgtggaagaatactaaatgcgaagtgtttcccaacaaatggaatgaga
atggttgctgtagggaacatgtttggagatataggtttctggaacgctgacgctaaagaa
gaggatggagatgggatttatttgtaccaacctcattcagctccagtatcagggatagtg
atcgaatcattttcaatgccaaagatgtacacatgctgtcatgatgggtttatcaggttg
atggacattgagaaggagctatttgattccctatacttcagtgattatcctatatgtgct
ttgtcccagagaccggacgacatgaattcactgtattacgctgagggaaatgggaaactt
ggaatatgggatttgagggctggaaagtcttcatcatcatggagtttgcatgaagatagg
atcaactcaatagattttaacttagcggacaattatatgctggctacaagttcaacagat
ggaactgcctgcatttgggatatgagaaatgctggagctatgaaaccaaggtctttgaga
actgttcaccataaaagagctgtgtgttctgcttacttttcacgatctggaagatttctt
gctacaacaagttatgatgacaaaattgggttttcatgtggagctaattatgaagctgta
tgtatgcttcgtcatcaaaacaatcactcattcagggctatatggggttgggatgactcc
tatgtattcattggcaacttgcaaaggggagttgacgtgatttcaacatacaaaatgaga
actgtttcggtgtctgctattcaatggcgcttggatgcacaccagtatgaggtcgggatg
cttgctggtgctaccggcggtggtcaggtgtgtctctggacaccatcttaa
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