Ipomoea triloba (trilobed morning glory): 116014430
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Entry
116014430 CDS
T07384
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 36b
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116014430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
116014430
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
116014430
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
FtsJ
Methyltransf_31
Methyltr_RsmB-F
PCMT
Motif
Other DBs
NCBI-GeneID:
116014430
NCBI-ProteinID:
XP_031110344
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Position
3:30704128..30707862
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AA seq
305 aa
AA seq
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MVARGRGGGGGGFRGGRGDGGRGGRGGRGGPGGGRGGGSAMKRGGGRGGGRGGGGRGRGG
MKGGCKVVVEPHRHEGVFIAKGKEDALVTKNMVPGESVYNEKRIAVQNEDGTKVEYRVWN
PFRSKLAAAILGGVDEIWIKPGARVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSGR
DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKTEG
HFVISIKANCIDSTVPAEAVFAQEVKKLQAEQFKPSEQVTLEPFERDHACVVGGYRMPKK
QKPAA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggttgccagaggtcgtggaggcggcggcggcggatttaggggtggccgaggagatgga
gggagaggtggaagaggaggtagaggagggcccggcggaggaagaggtggtgggagtgcc
atgaagcgtggcggaggaagaggcggcggaagaggtggtggaggaaggggacgtggagga
atgaagggtggttgtaaggttgtagtggagcctcataggcatgagggagtgttcattgct
aagggtaaagaggatgctcttgtaactaagaatatggtccctggtgaatctgtatacaac
gagaagagaattgctgttcagaatgaagatggaaccaaggttgagtacagagtttggaat
cctttccgttccaagttggcagctgctattcttggaggtgttgatgaaatttggattaaa
ccaggggcacgtgtcctctatcttggagctgcttcaggaacaacagtctctcatgtttct
gacattgttggtcctactggggttgtatatgctgtggagttttctcacagaagtggtaga
gatttggttaatatggcaaaaaagcgtactaatgttatacccatcattgaagatgccaga
catcctgcaaaatacaggatgttagttggtatggttgatgtgatattttccgatgttgct
caacctgatcaggcaaggattttagcactgaatgcctcctacttcttgaaaacagaaggt
cattttgtcatatccatcaaggcaaactgcatcgattcaactgtgccggctgaagcagta
tttgcacaagaggttaagaagctgcaagcagagcaattcaagccgagtgaacaggtcact
cttgaaccatttgagcgagaccatgcttgtgttgttgggggttataggatgcccaagaag
caaaaacctgctgcctag
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