Ipomoea triloba (trilobed morning glory): 116014437
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Entry
116014437 CDS
T07384
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116014437
03036 Chromosome and associated proteins [BR:
itr03036
]
116014437
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116014437
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
116014437
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
116014437
microRNA pathway
RISC loading complex
116014437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoMid
ArgoL2
AAA_7
Motif
Other DBs
NCBI-GeneID:
116014437
NCBI-ProteinID:
XP_031110351
LinkDB
All DBs
Position
3:18031539..18044900
Genome browser
AA seq
941 aa
AA seq
DB search
MPQWQMKEAEQKHVISRAPLQESRNQNSVSRILSRCDGRMEEAKRRRGRRKGKGVQMEKM
LEIGGNNNNNNNPPSSSSSDRRLSFPTRPGYGQLGTKCIVKANHFVAELSDRNLSQYTVK
FSPEINSTRLNKAIMTELVKRHKETELGNRLPVYDGRRMLYTAGLLPFNTKDFIITLADD
DEWSGITKERRFTVTIKFSAQADMAQLHNFLAGKQADAPFQALKIFDVVLRELASRRYIS
VGRFFYSPSIKKPQALGNGLQSWRGFYQSIKPTQMGLSLNIDMSTTAFIEPLPVVEFVAQ
VLGRDISSRPLSDADRVKVKKALRGVKVEVTHRGNIRRKYRISGLTSQPTRELIFPVDEE
KNMKSVIEYFQEMYGYTIQYPHLPCLQVGSQRKVNYLPMEACKIVEGQRYTKRLDEKQIT
SLLKSSCQRPREQELDILQTIKQNGYKEDPVAKEFGINIDDKLASVEARVLPAPWLKYHD
SGKEKECRPQQGQWNMINKKVINGSTVNHWACINFSRNVQENAARGFCQQLAQMCQVSGM
EFNSEPVIPIYSAKPDQVKKALNYVYNVAANKPGGKELELLIAILPDNNGPLYGTLKRIC
ETDLGLISQCCLTKHVLKISKQYLSNVSLKINVKMGGRNTVLLDALRWKVPLVSDIPTII
FGADVTHPESGEDCSPSIAAVVASQDWPEVTKYAGLVCAQPHRQELIQDLYRTWHDPQWG
KVSGGMIRELLLSFKKATGQKPLRIIFYRDGVSDGQFYQVLLFELDAIRKACASLEPGYQ
PLVTFIVVQKRHHTRLFANNHNDRNHMDRSGNVLPGTVVDSKICHPTEFDFYLCSHAGIQ
GTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYV
DNDAHENGSNSSMRCTRTTNGSGVRPLPALKEKVKNVMFYC
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagtggcagatgaaagaggctgagcaaaagcatgtgatctccagagctccattg
caggagtcgaggaatcagaattctgtgtctcgaatcttgtcgagatgcgatgggagaatg
gaagaagccaagaggagaagggggaggaggaaagggaaaggggtacaaatggaaaagatg
ttggagataggtgggaataataataataataataatcccccttcttcttcttcgtctgac
cggaggctttctttcccgactaggcctggctatggccaattggggaccaaatgtattgtg
aaggcaaatcacttcgttgctgagctatcagataggaacttaagccagtatactgtgaag
tttagtccggaaattaattcgactcgattgaacaaagctatcatgactgaattggtgaaa
cgccacaaagaaaccgagctggggaataggcttccggtgtatgatgggaggcgaatgctg
tacacagctggattgctcccttttaacacaaaagactttatcataactctggctgatgat
gatgagtggagtggcatcacaaaggagcgtcgatttactgtcacaatcaagttttcagct
caggcagacatggctcagttgcacaatttcctcgctgggaaacaagctgatgcccctttt
caagcgcttaaaatcttcgatgttgtattgagggaacttgcatcccgaaggtatatatct
gttgggagattcttctattctcctagtatcaagaaaccacaggctcttggtaatggctta
cagtcttggcggggcttttatcagagtataaaaccgactcaaatgggactatcactgaat
attgatatgtcaacgacagcattcatagaacctctcccggttgttgagtttgtagctcaa
gttttaggacgagatataagttccaggccactgtccgatgcagatcgggttaaggttaag
aaagccctgagaggtgtcaaagttgaagttacacacaggggaaacattaggagaaaatac
agaatttcgggtttgacatcacaaccaaccagggagctaatttttcctgttgatgaggaa
aagaacatgaaatcagtaatcgagtattttcaagagatgtacggatataccattcaatat
ccacatttaccttgcctccaagtgggaagtcaaaggaaagttaattatttaccaatggag
gcttgtaagattgttgaggggcagaggtataccaaacggctggatgagaagcagataact
tcgttgctaaaatcttcatgccaaaggcctagagagcaagaactcgacattttgcagaca
attaagcaaaatgggtacaaggaagaccccgttgccaaggaatttggcatcaacattgat
gataagctagcatcagttgaagctcgtgttctccctgccccatggttgaaataccatgat
tctggaaaggaaaaggaatgtcgacctcagcaaggtcagtggaacatgataaataagaaa
gtaattaatggaagcactgtcaaccactgggcttgcatcaatttctcgcgtaatgtccag
gaaaatgctgctcgtggcttttgccaacagctggctcagatgtgtcaagtctctggaatg
gaatttaattctgagccagtcatcccgatctattcggctaaaccagaccaggtaaagaag
gctttgaactacgtttataatgttgctgccaacaaacccggaggaaaagaactagaacta
ctcatagccattcttccagacaataacggtcctttgtatggtactctgaagcgaatttgt
gaaacagacctcggactgatatcgcagtgctgcctcacgaaacatgtcttaaagatcagc
aaacaatacctgtcaaatgtatcgcttaagattaatgtgaagatgggaggaaggaatact
gtgcttttagatgccttacgatggaaagttcctctggtaagcgacatcccaacgatcata
tttggggctgatgttactcatcccgaatctggagaggactgtagcccatcaatagccgct
gtcgtggcctcgcaagattggcccgaagttaccaagtatgcgggattagtgtgtgctcag
ccacatcgacaagaactcatccaggatctttacagaacatggcacgatcctcaatggggg
aaagtttcgggaggcatgattagggaacttttgctgtcatttaagaaggccactggacaa
aaaccgctgaggataatattctatagggatggtgttagtgatgggcagttctatcaggtt
ctactgttcgagctcgatgctatccgcaaggcttgtgcatcgttggaaccgggttaccaa
cctctggttactttcattgttgtccaaaaacgtcaccacacgaggctttttgctaacaac
cacaatgaccgaaatcatatggacaggagtgggaatgtgttacctggtactgtggtggat
tctaagatttgccatcctacagaattcgatttttatctatgcagtcatgctgggattcag
gggactagtcgtcctgcacactaccatgttctttgggacgagaacaacttcacagcagac
gaaatccaatctctgacaaacaacctttgttacacgtatgcacgatgcactcggtccgtt
tctgttgtgccacctgcatattatgcacatttggcggcttacagagcgcggttttatgtt
gataacgacgcccacgagaacggctcgaacagctcgatgcgctgcacgcgcaccacgaat
ggttccggggtgcggcccctgccggcattgaaggagaaggtgaaaaatgtaatgttctat
tgctag
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