Ipomoea triloba (trilobed morning glory): 116014455
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Entry
116014455 CDS
T07384
Name
(RefSeq) SET and MYND domain-containing protein 4
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
itr04990
]
116014455
Domain-containing proteins not elsewhere classified [BR:
itr04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
116014455
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_12
TPR_2
SET
TPR_8
TPR_17
TPR_16
TPR_9
TPR_11
TPR_14
TPR_MalT
zf-MYND
TPR_10
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
116014455
NCBI-ProteinID:
XP_031110376
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Position
3:14159583..14165301
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AA seq
784 aa
AA seq
DB search
MEKLKSLVPNALGQEISESTPDGLPATCSSLLEFFHRLPQFHQIVKELTDPEMALCGKDH
SAASETKLQGNECFSRGDYLKALHFYTQALRFAPTNSNDTEKNLAAMLYVNRASALHKMG
LIVECLQDCDRALANFPTYAKAWFRRGKANASLGNFEDAIQDLNVSLKMEVSLSGKRQIE
DELRIILDQHKLKHSSSYKSNRNESDDTMLDEPDRANMQCVSLPTKGRGMVSLADIPIGS
LVHKEDPYAAIILKNCRETNCHFCFNELPMHAVPCESCSIPLYCSSQCQLVSGGKEFGKT
LGKVSHHNELPDELEKYISECVSIGDSGPRTEDIAEHRHECQGVHWPAVLPSEVVLAGRV
LVKFLEQQKDSSGFSNLLTVLDLCHNFVQLPPDTKLEMHIYSIILLNCLRNSYAPKLPVT
GVIISQLVILLSQIRVNSMAIVRMKSLDTKGSLDEHVNALTSTLEQVKVGQAIYLAGSMF
NHSCRPNAHAYFLSRTLYVRTTDSVSVGSELELSYGPQVGQWDHEDRQQILRDHYSFSCQ
CRGCSQLNLSDLCINAYRCAKPDCLGVVPDSTLASYVKQKLNHVPLVSSVSYPQKQVEKV
ENERISDVAHYAVHKADYHLKPGHCLNCDLYHDLEAARATISKAESSIRRLQDAIASNDV
PVEVLSNALKASDILRSTLHLFNKRIAEVEDNIAQAMCVVGEPQAARDHCKASIKILEKL
YDPNHIVIGNELIKLGSIQLQLGNCDAASATKRAAEIFLRYFGSHAIVIFPYLQRLQQEA
GCLA
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctgaaatccttagtgcccaacgccctaggccaagaaatctctgagagcacg
ccggatggcctccccgccacctgttcttccctcctagaattcttccaccgcttgccccag
tttcaccagattgttaaggagttgacagacccagaaatggctttgtgtggcaaggaccat
agtgctgcttctgaaacaaagcttcaaggcaacgaatgcttctccagaggagattatctt
aaagcgttgcatttctatacacaggcattacgctttgctccaacaaacagcaatgacaca
gagaaaaacctagctgctatgctctatgtgaatcgtgcatctgcattgcataaaatggga
ctaattgtagagtgtttacaagattgtgatcgggctcttgcaaattttccaacctatgct
aaggcatggttcaggagaggtaaagctaatgcttctttgggaaatttcgaggatgcaatc
caagatctgaatgtttcactaaagatggaagtgtctttgagtggaaagagacaaatagaa
gatgaactcaggattattttggaccaacataagctgaagcatagttcatcgtataagtcc
aacaggaatgagtcagatgatactatgttagatgagccagaccgagcaaatatgcagtgt
gtatctttacctactaagggaaggggaatggtatcccttgctgatattccaataggctcc
ttggttcataaagaagatccttatgcagcgatcatcttgaagaactgtcgggagactaac
tgtcatttctgcttcaatgaactaccaatgcatgcggtgccctgtgaatcgtgctctata
ccactatactgctctagtcaatgtcaattagtatcgggaggaaaagagtttggtaaaact
ctggggaaagttagccatcataatgagctgccagatgaactcgaaaagtacatttcagaa
tgtgtttcgattggtgattctggtccacgtactgaggatattgctgagcatagacacgaa
tgtcaaggtgtccattggcctgcagtattgccctcagaagtagttttggctggtcgagtt
cttgtgaaatttttagagcaacaaaaggattctagcggtttttctaaccttctcacagtt
ttggatctctgccacaatttcgtgcagctccctcccgacactaagctggagatgcatata
tactcaatcattctgttgaattgtcttcggaattcttatgcacctaaactccccgtgact
ggggttatcatttcacagctggttatacttctatcgcaaatcagagtaaattcaatggct
attgtccgcatgaagtctttagatacaaaaggatccttagacgagcatgtgaatgcttta
accagtactttagaacaggtcaaggtgggccaagctatttatttggctggcagtatgttt
aaccattcttgtaggccaaatgctcatgcttactttctttcacgtaccctttatgtccgc
acaacagattctgtgtcagtgggatccgaactggagctctcttatggtccacaggttggg
cagtgggaccacgaagaccgccagcagatcttgagagaccattactcatttagctgtcaa
tgtagaggctgttcgcaactaaatctatccgacctctgtataaatgcataccggtgtgct
aaaccagactgccttggtgtagtccccgacagcactctcgctagctatgtgaaacaaaaa
ctgaaccatgtcccgcttgtctctagtgtttcctatcctcagaaacaggttgaaaaggtc
gaaaatgagagaatcagtgatgtggctcattatgcagttcataaagccgattatcatctt
aaacctgggcattgcttgaattgtgatttgtatcatgatctagaagctgcacgtgctacg
atcagcaaagctgagagttctatcaggaggttgcaagacgcaattgcttccaatgatgtc
ccggttgaagtactttccaacgctttgaaggcttccgatattctgagatcgacactgcat
ctgtttaacaagagaattgcagaggtggaggacaacatagcacaggcaatgtgtgtggtt
ggggaaccgcaagctgcaagggaccattgtaaagcgtcaatcaagattcttgaaaaactg
tatgatcccaatcacattgtcatcgggaacgaactgattaaacttggatccatccaactg
caacttggcaactgcgatgctgccagcgctacaaagagagctgctgaaatctttttacgg
tattttggatcccatgcaatcgttatatttccatatctgcaacgcctccagcaagaagct
ggctgcctggcatga
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