Ipomoea triloba (trilobed morning glory): 116014458
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Entry
116014458 CDS
T07384
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
itr03400
]
116014458
Enzymes [BR:
itr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
116014458
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
116014458
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Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
116014458
NCBI-ProteinID:
XP_031110380
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Position
3:complement(5003608..5008951)
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AA seq
592 aa
AA seq
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MRIVTYNVNGLRPRVSQFGSLPGLLDSLDADIICFQETKLSRQDLRADLVRAEGYESFFS
CTRTSDKGRSAGYSGVATFCRVKSAISSNEVALPIGAEEGFTGLLKASQGCGSRKDNSSL
IAQGLEGFSRDELLKVDSEGRCIITDHGHFVLFNIYGPRAGSDDSERIQFKLTFFKILER
RWDCLLRQGRRIVVVGDLNIAPASIDRCDAGPDFEKNEFRKWFRSLLVQSGGSFLDVFRT
KFPDRREAYTCWSTSTGAEEFNYGSRIDHILTAGSCLHEEHNQGHDFVTCHVKDCDILVQ
FRRWKPGNTPRWKGGRSIKLEGSDHAPVYMTLTGIPEVLQHNTPSLSTRYHPQVSGYQQT
LVSMLMKRESSNPTEINGGPTSSPDESITDPNITQDSSISRLEESYECSSSKDSHMTMRS
LGSTANLLPCSESKKRARDSRGSQLTLKSFFQKASSESGTLDNNCVVDKHNQKDISNSLP
NVYCDNAAENGNHNSESASAQEVGLLDACNSSDKEKRADALQEWQRIQQFMQNSVPLCKG
HKEPCVSRLVKKPGPNLGRRFYVCARAEGPASNPEANCGYFKWAASKPKGKN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaggatagtgacgtacaacgtgaacggcctaaggcctcgagtctcacagttcggttct
cttcccggccttctcgattcgctcgacgctgatatcatctgcttccaggagacgaaacta
tcgagacaagacctgcgagccgacttggttagggctgaaggctacgagtccttcttctct
tgcactcgcacttccgataagggccgctccgctggctattccggtgttgctacattttgc
cgtgtaaaatctgcaatttcgagcaatgaagtggccttacccattggtgcagaggaggga
tttacaggacttcttaaggcttctcagggatgtggatctagaaaagataacagttctctg
attgcacaaggccttgagggattttctagggatgaacttcttaaagtcgatagtgagggg
cgttgtataatcacagatcatgggcattttgttcttttcaatatatatggtcctagggct
ggttctgatgattccgaaagaatccaatttaagcttacatttttcaagatattagagaga
agatgggattgtctactacgtcaaggaaggaggatagttgttgttggggatcttaatatt
gctcctgcttctattgatcgttgtgatgcaggacccgattttgagaagaatgagtttaga
aaatggtttagatcgttattggtgcaaagtggtgggagtttcttggatgtattcagaaca
aaatttcctgatagaagagaagcctatacatgttggtcaactagtactggtgctgaggaa
tttaattatgggtcaaggattgaccatatacttactgcagggtcatgtttacatgaagag
cacaatcaaggccatgactttgtaacttgccatgttaaagactgtgacatactggtgcaa
ttccgaaggtggaaacctggaaatacaccaagatggaaaggaggaagaagtatcaagtta
gaaggttctgatcatgctcctgtttatatgacattaacgggaatcccagaagtattacaa
cacaacactccctcattatctaccagataccatccacaggtctctgggtatcagcaaact
cttgtgtcaatgttaatgaaaagggaatcatccaatccaactgaaattaatggtggaccc
acttcatcaccagatgaaagtattactgatccaaacattacacaggatagttccatatca
agattagaggagagctatgaatgctcctcaagtaaagattctcacatgacaatgcgtagt
ttaggaagtactgctaatttattgccttgctcagagagtaagaaaagagcacgagacagt
cgggggtctcagctcacactcaagtcatttttccagaaagcttcaagtgaaagtggaact
ttagataacaattgtgtggtcgacaagcataatcagaaggatatctctaattcccttcca
aatgtatattgtgataatgctgctgaaaatggtaaccataactcagagagtgcatctgct
caggaggtaggtctgctagatgcatgcaactcttcagacaaagagaagagggctgatgca
ttgcaggagtggcagaggattcaacaatttatgcagaatagcgtaccactttgtaagggc
cataaggagccttgtgtttctaggcttgttaagaaaccaggccccaatttgggacgcagg
ttttatgtctgcgctcgtgctgagggacctgcatctaatcctgaagcaaattgtggttac
tttaagtgggctgcttcaaaacccaagggcaaaaactag
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