Ipomoea triloba (trilobed morning glory): 116014692
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Entry
116014692 CDS
T07384
Name
(RefSeq) pumilio homolog 24
KO
K14844
pumilio homology domain family member 6
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116014692
03009 Ribosome biogenesis [BR:
itr03009
]
116014692
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116014692
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116014692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CPL
hnRNP_Q_AcD
Clathrin
YbjQ_2
RAE1_2_domI_C
POPDC1-3
BEX
Motif
Other DBs
NCBI-GeneID:
116014692
NCBI-ProteinID:
XP_031110494
LinkDB
All DBs
Position
4:23953962..23959810
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AA seq
649 aa
AA seq
DB search
MAAKGEQSKKRKHVSHPKGDATKSNPKKLKSASGNPKDGPKKPFISSKQGAKLKQKEAKP
RAQTDNAESKRESRLRAKELTEARKKKRKRHYTLEQELTKLWEKMRQRNISKEDRSRLVT
EALNKMQGKIPEVASSHVSSRVLQTCVKHCTVEERNAVFQELRPNFITLACNTYSVHLVT
KMLDNASKEQLAKFISSLHGHVASLLRQMVGSLVIEHAYQLGNSAQKQALLMELYSSEIQ
MFKDLLSVKETRVVDVISKLQLQKSSVLRHMTAVLQPILEKGILDHSIIHKALMEFLSIT
DQSSAADVIQQLSSADLVRMMHTKDGSRIAMLCIKHGSAKDRKKIIKGMKGKIEKIAHDK
YGCMVLVCILSTVDDTKLLSKIIIRELEGILKEIVLDQNARRPLLQLLHPLCSRYFSPDD
LDSMNLSIPSLLRGPSEVDEAEPLGVDEEDEIDAGVANSDKTKSPPKVQHLNEGGKKDPL
RRRQELLVDSGLAEKLINVCLEMTGELLRSNFGKDVIFEVASGGADGILHPTLDEKLGAL
HGAIASLASQPKLEESEEEHLLEQYHSSRTIRKLVLECPAFACKLYENALKGKCATWVQG
HSSKVVSALWETSDPAVRELIKEEMQPLVDNGVLKVAQEKETTKAGRKQ
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaaaggagagcaatcgaagaagagaaaacacgtctcccacccgaaaggagac
gctactaaatcgaatcctaagaaactgaaatcagcttccggcaacccgaaggatggtccg
aagaagcctttcatatcgtccaagcaaggggcgaaactgaaacaaaaagaagctaagcct
cgagctcagacagacaatgcggaatcgaagcgggagagccggttacgcgctaaggaacta
actgaagctaggaagaagaagaggaagaggcattatacattagaacaagagcttacaaaa
ttatgggagaagatgagacagagaaatatttcgaaagaagatagatccaggttggtgact
gaagctctgaacaagatgcaagggaaaatccctgaagttgctagctcacatgtttcttct
cgtgttctccagacttgtgtaaagcattgcaccgtagaggaaaggaatgctgtgtttcaa
gagctccgccctaactttattacacttgcctgcaacacatattcagtccatctggtgaca
aagatgttagacaatgcatccaaagaacagctggcaaaatttatctcgtctcttcatggg
catgttgcctctcttcttcgtcagatggttggttcgctggttattgagcatgcatatcaa
ttgggaaattcagctcagaagcaagctcttctaatggaactctattcgtctgaaattcag
atgttcaaggatttactctcagttaaggaaacaagggttgtagatgtcatttccaagcta
cagctacaaaaatcttcagtcttacgtcatatgacagctgtgcttcagcctattctggag
aagggaatccttgaccactctatcatacacaaggcactgatggagtttttaagcatcact
gatcagtcttctgctgcagatgttattcaacagttatcaagtgcagaccttgtccggatg
atgcacacaaaggatggatccaggattgcaatgctttgtatcaagcatgggagtgcaaag
gataggaagaaaatcatcaaaggtatgaaaggcaaaattgagaagattgctcatgataaa
tatggttgtatggtgcttgtgtgcatactttcaactgttgatgacacgaaacttctatca
aagatcattatccgtgagcttgaggggattctgaaggaaattgttttggatcagaatgca
aggcgaccactgttgcagctacttcatcccctctgttctcgctattttagtccagatgat
ttggactcaatgaatttatcaattccttcactcctcaggggaccgtcagaggtggatgaa
gcagagcctttgggtgtagatgaagaagatgaaattgatgcaggtgtggccaactctgat
aaaactaaaagtccaccaaaagttcaacatttaaatgagggtgggaaaaaagatccttta
aggaggaggcaagagttgttggttgatagtggacttgctgagaaactcatcaatgtgtgc
ttggagatgacaggagaattacttagatccaattttggtaaagatgtcatatttgaggtt
gcatctggaggtgctgatggaattctccatcccactctggatgaaaagttgggtgccttg
cacggagctatagcatccctcgcttcacagcctaaattagaagagtcagaagaggagcat
ctccttgaacagtaccattctagtaggactataagaaaactggtcctagagtgccctgcc
ttcgcttgtaagttatacgagaacgctttaaaaggaaaatgtgcaacgtgggtgcaaggc
cacagttcgaaggtggtaagtgcgctgtgggaaacctcggatcctgctgtacgggagttg
atcaaggaagagatgcagccattggtagataatggtgttctcaaggtagctcaagaaaag
gaaaccactaaagcaggacgcaaacaataa
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