Ipomoea triloba (trilobed morning glory): 116014718
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Entry
116014718 CDS
T07384
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116014718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
itr03400
]
116014718
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
116014718
FA (Fanconi anemia) pathway
116014718
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
116014718
NCBI-ProteinID:
XP_031110522
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Position
4:425818..431545
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AA seq
706 aa
AA seq
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MSTMRRRHRIISSSDEEDEEEEVVVEVSPQPRQPPRVVEEEDDSTTANLNFETVTLNSPA
PPTPTPSSEVADCTVGRVLQEVGLRLRVEWLQSCLAQLEGSVPRFRAFDDATKAKLCFQQ
FLYSDMNLSGAGELPPNVHTLHSVDLKGPFVLQVDEIVNISCPLRGRYQESSAGIKRCLK
LSMTDGIQRVFGMEYRPIKGLDVMAPAGIKVAICNVNVRHGLLMLVPEVFEILGGMVEEL
EGVRQRLVKEVNKPPRGKRTRNGVVPPLATRLTRAAWPVEGATAPECPDAPRGSDRPPLY
QERGTLSGTRASNRFGDVAAPIRREEAETDLSFVEAMDMSSIPASNRVAALNRREDAESG
LSPMESMHASSTAAVSRGDVEASISREDTEIGLSPMEAMHASSTAAVSRGDVAASISRED
TEIGLSPMEVMDDEESHMVDIETMSTIPSSSTTGEDIAVSVHTEEAASISLPNGAMDAED
IDSIDAGIVSDTLAQGRTQSNIPVHITTVDSEDELPTAAIDAEEVCMADELEHPFILTGD
KEIPFTYMASLSAKWAAAMDKTSSVKGKIKCFLTGVKSFKYKERSTYELRVYVDDGSLIS
EILIDHNVVQKGTGYSPMEVTNALASSDKKQENDMKETMKQFQRFLMNFEGTMIVEMNEE
SPFPVATEMNQGCPASDAWLLLRRLQSSTSVQLQPHRGSDTIHLSP
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgatgagacgccgccaccgaatcatcagttcatccgacgaagaagacgaagag
gaagaagtagtagtagaagtgtctccacagcctcgacaaccaccgcgagtcgtggaggag
gaagacgattccacaaccgccaatctcaatttcgaaactgtaaccctcaattcccccgcc
cctcccactcccactccctcatccgaagtcgccgattgcaccgttggccgcgtcttgcaa
gaggtggggctccgattgcgagtggaatggctgcagtcctgcctcgcccaattagaggga
tccgtcccgagatttcgggccttcgacgacgcaaccaaggctaagctgtgcttccagcaa
ttcctctactcggatatgaatttatcaggtgccggggagctccctccaaacgtccacaca
ttgcattccgttgatctcaaaggtccctttgtgcttcaggtggacgagatagttaatatc
agctgtcctctaagaggaaggtaccaagaatcatctgccggaatcaagaggtgcctcaaa
ttgtcaatgacagatggcattcaacgcgtgtttggcatggaatacaggcccataaagggg
cttgatgtcatggctcctgctggtattaaggttgccatttgtaatgtcaatgtaaggcat
gggctcttaatgctggtccctgaagtttttgaaattttgggtggtatggttgaagagttg
gagggagtgcgtcagaggcttgttaaagaagtaaataagccaccaaggggaaaaagaaca
agaaacggagttgttcctcctttagcaactagactaactcgtgccgcatggcctgtagaa
ggtgctactgctccagaatgccctgatgctcccagagggagtgatcgacctcccctgtat
caagagagaggaaccttgtctggaacccgtgccagtaataggtttggagatgttgcagct
cccatcaggagggaagaagctgaaactgatctttcctttgtggaggctatggatatgtca
agtatccctgccagtaatagggttgctgctctcaacaggagggaagatgctgaaagtggc
ctttcacccatggagtcaatgcatgcgtctagcactgctgcagttagtaggggagatgtt
gaagcttctatcagtagggaagatactgaaattggcctttcacccatggaggcaatgcat
gcgtctagcactgctgcagttagtaggggagatgttgcagcttctatcagtagggaagat
actgaaattggcctttcacctatggaggttatggatgatgaggaaagccatatggttgac
atagaaaccatgtctacgatcccttccagcagcaccactggagaagatattgcagtttct
gttcacacagaagaagctgcatctatttcactgcctaatggagctatggatgctgaagac
attgattccattgatgcaggaattgtgtctgacactcttgcacaaggcagaactcaaagt
aacattccagtccatatcacaactgtagactctgaagatgaattacctactgcagctata
gatgctgaagaagtttgtatggctgatgagttggagcacccatttatccttactggagac
aaggaaattccttttacttacatggctagtttgtcagctaagtgggcggctgctatggat
aaaacttcctctgtaaaaggaaaaatcaagtgctttcttactggtgtgaagagttttaaa
tataaagaaaggagtacatatgagcttagagtttacgttgatgatggaagcctcatctct
gagatacttattgatcacaatgttgtgcaaaaaggaactggttactctcctatggaagta
actaatgctcttgcttcttcagataaaaagcaagaaaacgacatgaaagaaactatgaaa
caattccagagattccttatgaattttgagggaacaatgattgtagagatgaatgaagaa
tctccattcccagttgccactgaaatgaaccaggggtgtcctgcctccgatgcttggttg
cttcttaggcgactgcaatcctctacttcggtgcaattacagcctcatcgcggctcagat
actattcatctatccccttaa
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