Ipomoea triloba (trilobed morning glory): 116015088
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Entry
116015088 CDS
T07384
Name
(RefSeq) RAB6A-GEF complex partner protein 1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116015088
Membrane trafficking [BR:
itr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
116015088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_RSE1_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
116015088
NCBI-ProteinID:
XP_031110949
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Position
4:complement(486401..495814)
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AA seq
1124 aa
AA seq
DB search
MYMPFGWPQVIPLEPGICPSSLRIVYLKVTNRFLLVVSPTHLELWSSSQHRVRIGKYERD
SGSILKEGDNLQAVWSSETKLIAVLTSSLYLQILKVNFTEKKIQLGGKQPSVLVLANVTL
LLNEQAPFADKNLTVSNIICDSRNMLVGLSDGSLYNISWKGEFCGAFHLDAQLHDGSEAI
KISNSLENGLASVGVQVDSELNHYSSKSSGVIYLDFSIPLRLLFVLFSDGQLVLCSVSKK
GFRQAESVKAEKRLGSGDAVCVSVASDQQILAVGTTRGVVELYDLAESVSLLRSVSLYDW
GYSVEDTGAVNCIAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTICQIGLSSVSSPVIKP
NQEYKNEPMMGGTSLMHWDEHGYRLYAIEEGSLERIIAFAFGKCCLNRGVSGTTYVRQVI
YGEDRLLVVQSEDTDELRILHLNLPVSYLSQNWPVLHVAASRDGMYLAVAGFHGLILYDL
RLKKWRVFGDITQEQKIQCRGLLWLGKIVVVCNYDSSSNTYELLFYPRYHLDQGSLLCRK
PLLAKPMVMDVYQDYILVTYRPFDVHIFHVKLSGELTPSKSPDLELSTVRELSIMTAKSH
PAAMRFIPDQLPRESINENGVSLASHVLTREPSRCLILRTNGELSLLDLDEGRERDLTDS
VELFWVTCGQSEEKTNLIEEVSWLDYGHRGMQVWYPSPGVDSFKQEDFLQLDPELEFDRE
VYPLGLLRNAGVVVGVSQRMSFSACTEFPCFEPSPQAQTILHCLLRHLLQRDKMQEALRL
AQLSAEKPHFSHCLEWLLFTVFEAEISRQNTNKNHTTVPNHATSCSLLEKTCDLIRNFPE
YFDVAVSVARKTDARHWADLFAAAGRSTELFEECFQNRWYRTAACYILVIAKLEGPAVSQ
YCAMRLLQAALDESLYELAGELVRFLLRSGREYEPTTTDSEKLSPRFFGYFLFSSSFGRQ
ALDSKGSFKEQSPHISSVKNILESHASYLMCGKELSKLVAFVKATQFDLVEYLQRERYGS
ARLDNFASGLELIGQKLQMETLQSRLDAEFLLAQMCSVKFKEWIVVLATLLRRSEVLFDL
FQHDLRLWNAYSTTLQSHPAFAEYHDLLAFLELKLRPTSNPEEK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgccatttggatggccacaggtcatcccgctggagccaggaatttgtccttct
tctctgcggattgtgtatctgaaagtcaccaatcggtttttgctcgttgtgtcgcctaca
cacctcgagctctggtcgtcttctcagcatagagtgagaatcgggaagtatgagagagat
tcgggttccattctgaaggaaggcgataatttgcaggccgtatggagttctgagacgaaa
ttaattgccgttcttacatcttctttgtatctccaaattcttaaggttaattttacagaa
aagaaaatacaacttggagggaaacaaccgtctgtgttggttctagcgaacgttacttta
ctcttgaatgagcaggctccatttgctgacaagaatttgacagtgagcaatattatctgt
gatagcagaaacatgttagttggactctctgacggatcactgtacaacatatcttggaag
ggtgagttttgtggagcctttcatcttgatgctcagcttcatgatggtagtgaggctatt
aaaatttcaaattctctggaaaatggtctagcttctgttggagttcaagttgattctgaa
cttaatcattattcatcaaaatcatctggtgtgatctacctggacttttccataccttta
aggttactgtttgtgctattttcggatggacaacttgtcctgtgttctgtgagcaagaag
ggcttcaggcaagctgagtctgtcaaagctgaaaagaggttgggctctggtgatgctgta
tgtgtctctgttgcttcagaccaacaaattcttgctgttggtaccacaagaggtgttgtt
gagttgtatgatctagcagaatcggtttcactattacgttcagtttctttatatgactgg
ggatattctgtggaagatactggtgctgtaaattgtattgcatggacacctgacaattct
gcttttgcagttggctggaagttaagaggactcacagtttggtctgtttctggctgccga
ttaatgtctaccatctgccaaattggattaagttctgtatcttctccagtaattaagcca
aatcaagaatataaaaatgaacccatgatgggtggaacctccctgatgcactgggatgaa
catggatacaggctttatgctattgaggaaggatctttggagagaataattgcattcgct
tttgggaaatgctgcctcaacagaggagtttctgggacaacttatgttcgccaagttata
tacggtgaagataggttacttgttgtgcaatcagaagatactgatgaactcagaatcttg
catctcaaccttccggtttcttatctttcccaaaattggcctgttctacatgtagctgct
agcagagatgggatgtacttggctgttgctggttttcatgggttgatcctgtatgaccta
cgtttaaaaaaatggcgtgtttttggagatattactcaggaacaaaaaattcaatgcaga
ggcttgctatggctggggaaaattgttgttgtttgcaactatgatagttcttccaatacg
tacgaattacttttctacccgagatatcaccttgatcaaggttcactactttgccggaaa
cctttgcttgcaaagccaatggtcatggatgtttatcaagattatatacttgtcacttac
cgcccgttcgatgtccatatttttcatgtgaagctgtctggtgaactgacaccttcgaag
tcaccggatttagagctttctacagtacgagagctctcgatcatgactgcaaagagccat
cctgcagcaatgcggtttatccccgatcagcttcctagggaatctatcaatgagaatggt
gtatcattagcatctcatgtcttaaccagggagccttctaggtgcttgattctcaggaca
aatggagaactttcactgcttgatttggatgaggggagggaaagagatctcactgactcg
gtggagttgttctgggttacctgcggtcagtcagaggagaaaacaaacctaattgaggaa
gtgtcatggctggattatggccaccgaggaatgcaggtttggtatccatctccaggtgtc
gacagttttaaacaagaggatttcttgcagttggacccggagctggaatttgatcgtgag
gtgtatcctcttggtctactgcgcaatgctggggttgttgtgggtgtttcacagagaatg
tctttttctgcatgtactgagtttccatgtttcgagccatctcctcaagctcagaccata
ttgcattgcttactacgacatcttctgcagagggacaaaatgcaagaagcattacggttg
gcacaattatcagcagaaaagccacatttttcacattgtttagagtggcttctttttaca
gtttttgaagctgaaatttccaggcaaaacacaaataagaatcacactacagttcctaat
catgctacctcctgctcacttctggaaaagacctgtgatctaatcagaaattttcccgag
tattttgatgtggccgttagtgttgcacgaaaaactgatgctcgacattgggcagatttg
tttgctgctgctggtagatccactgagttgtttgaggaatgcttccaaaatagatggtat
cggactgctgcttgctatatactggtaattgcaaagcttgagggtcctgctgtgagtcag
tattgtgcaatgcgtttattgcaggcagcacttgatgaatctttatatgaactggctggg
gaactagtgaggtttctcctcagatctggacgggaatatgaacctacaacaacagattct
gagaagctatctcctcggttctttggatattttcttttttcgtctagttttggtagacag
gctctggattcaaaaggctcattcaaggagcagagtccgcatatttcttctgttaagaat
attttagaaagccatgcaagctatctgatgtgtggaaaagaactttcaaagcttgttgca
tttgtgaaggccacgcagtttgatcttgtggaatatttacagcgagaaagatatggatct
gctcgcttggacaattttgcttccgggcttgagcttataggacagaagcttcaaatggag
acattgcaaagtaggttagatgcagaattcctattggctcaaatgtgctctgtcaaattc
aaagaatggattgttgtcctggccacacttctgaggcgatctgaggttttgtttgattta
tttcaacatgatttgcgtttatggaatgcatatagcacaactttacagtcacatcccgca
tttgctgaataccacgatctgcttgcattcttggaactgaagctacgccccacttcaaat
ccagaagaaaaatga
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