Ipomoea triloba (trilobed morning glory): 116015112
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Entry
116015112 CDS
T07384
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116015112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116015112
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116015112
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
HECT type E3
116015112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Arm
Motif
Other DBs
NCBI-GeneID:
116015112
NCBI-ProteinID:
XP_031110980
LinkDB
All DBs
Position
4:4274742..4283405
Genome browser
AA seq
1556 aa
AA seq
DB search
MENRGQKRTDKADELPADKRACSSLEFRASSSNSSVQTPQEGHDGDMDTSSSTSGSTRSD
GEGERDSYGSCDSDNSYRDYYRRRSLGDQSKFRNVLTSLTEESEESGQLAALTELCELLS
FCTDSSLSSLMADSFSPVLVRLARHEHNPDIMLLAIRALTYLCDVHPRSSGFLVRHDAVP
ALCQRLMAIEYLDVAEQCLQAMEKISQEQPLACLQSGAIMAVLNYIDFFSTSVQRVALST
VLNICKKLPSENPSPFMDAVPILCNLLQYEDKQLVESVASCLIKIVEQVCHSSDMLVELC
KHGLVQQATHLIDLNSRTTLCQPVYIGLIGLLVKLASGSIVAVKTLFDLNISSIVCNILS
IHDLSHGMPSTAVVDGQHNQVHEVLKLLHELLPPIAREQEIQPATEKESFLMSRPDLLQK
FGIDLLPVLLQVVNSGANLYVCYGCLSIINKLVYFSNSDMLVELLQGTNLASFLAGVFTR
KDHHVVMLALQIVDTLLQKLSDVFLNPFVKEGVVFAVDALLSPEKSSQFMFPVSNGVQLS
SESSKTSAPRGAQRCLCFAFGVGQSSTNSESGSCKLEIETVQNLAQHIKTNYFAAELMNP
EKGLTDVLQKLRTLSSALTDLVNKYLNDVDDSYSQRESDFYDLLHQIMSQLNGKNSISTF
EFIESGIVKSVVNYLSNGQYLIGKTENVSSLFWQYSIEKRFEVFGRLLLSSSDPSFEDLP
FLSLIRQLQSALSSVENFPVISSHTSRLRNSYATIPYGRCTSYPCLKVQFVKGEGETDLC
DYLKDIVNVDPFSSLDTIEGYLSPKVRNKKTEHSKSPSQAMEEEGSASQLSPDLSPSQVR
TPDAVELDSIRFDVNQVQLSKREGDDIASSAPVETANTEQANTDPMDITDVHMESLGQRQ
LHLSEENSIIAECPQCSNEEGSSMKLLFYLEGQKLNNTLTLYQAILQQQIEAENDAITNA
KVWNQVHRITYKSSVRRKQSCAQKCHHETHHSALHDKHTPWQQYTPFFANTFASAVVDID
RSNPTYDILSLLRSLEQMNRFRFHLISRERVYAFAEERTNDLDNLKFDYFFVPQTEFVNN
KLTDKLEQQMRDPFAVSVGGLPYWCTQLMDSCPFLFGFEARCKYFRLAILGNQPVQQPQL
PSNNSGGLNRRQLSNGGFPRKRFLVHRNKILDSASQMMDLYASQKVVIEVEYSEEVGTGL
GPTLEFYTLVSHEFQKSGLGMWRGDCMSSGNISLADDAHGSLLFAFGLFPRPWSQSVSAL
GEIEFSEVLKKFVLLGQIVAKSLQDGRVLDLPFSKAFYKLILGKELSIYDIQSFDPELGR
TLLEFHALAERKKHVESLRERKSTLMPELYFRNTKIEDLCLDFSLPGYPDYILTSDSETV
DLSNLEEYVSLIVNANIGSGVSRQVESFKSGFDQVFPIKHLQIFSEEELERLLCGEREIW
NSNELVDHIKFDHGYTASSSPAINLLEIIQEFNIEKQRAFLQFVTGAPRLPPGGLASLNP
KLTIVRKKCSKWADDDLPSVMTCANYLKLPPYTTKEKMKEKLLYAITEGQGSFYLS
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcgaggccagaagagaacagataaggctgatgagcttccggctgataagaga
gcctgtagttcattagagttccgggcaagctcatcgaactcatctgttcaaacccctcaa
gaaggccatgatggtgatatggacacatcctcatcaacttcgggatcaactcgatccgat
ggagaaggggaacgggactcctatggatcttgtgactctgacaacagctacagggactat
tatagacggagatcattgggtgatcaaagcaaattcaggaatgtcttgacgagcttgacc
gaggagagtgaagaatcagggcaattggctgctcttactgagctatgtgaattgctatct
ttttgtaccgatagttccctttcgagcttaatggcagattcgttctctcctgtcttagtt
agattggcgaggcatgagcacaatcccgatataatgctgttagcaatcagggcactgact
tacttgtgtgatgttcatcctcggtcttctgggtttctcgttaggcatgatgctgtccct
gctctttgtcaaagattgatggccattgagtacttagatgtggctgaacaatgcttgcaa
gcaatggagaaaatttcacaggagcagccacttgcttgtttgcaatcgggggcaataatg
gctgttctaaactacattgatttcttttcaactagtgtacagagggttgcactttcaaca
gttctaaatatttgtaaaaaacttccctcggaaaatccctcacctttcatggatgcagtt
ccaatattgtgtaatctgcttcaatatgaagataaacagcttgttgaaagtgtggctagt
tgcttgatcaagattgtggaacaagtttgccactcttctgatatgcttgtggagctttgt
aaacatggactagttcaacaggccacacatctgatagacttgaatagccgaactacttta
tgccaaccggtttacattggcttaatagggttacttgttaaactcgcttctggttctatt
gtggctgttaagactctctttgatcttaatataagcagcatagtatgtaatattttgtcc
attcacgacctctctcatggaatgccatcaactgctgtggttgatgggcaacataatcag
gtacatgaagttctaaagttattacatgagctcctccctccaatagccagagaacaggaa
attcaaccagccactgagaaggaatcttttctcatgagccgccctgaccttttgcaaaaa
tttggaattgatttacttcctgttctccttcaggtggttaattctggtgcaaatttatat
gtttgttatggctgtctctccattatcaacaagttagtgtatttcagtaattcggacatg
cttgttgaattgctacaaggaaccaatcttgcaagctttttagctggggtgttcactcgc
aaagatcatcatgtagtgatgctagctcttcagattgttgatacacttctgcagaagctc
tcagatgttttcttaaacccctttgtcaaggaaggtgttgtttttgctgttgatgcacta
ctttctccagaaaaaagttcacagtttatgtttccagtgtccaatggtgttcaattgtca
agcgagtcaagtaagacatcagcaccaagaggtgcgcagagatgcttatgttttgctttt
ggtgttggccagtcttcgacaaattctgaatctgggagttgcaagcttgagatagagact
gttcagaatcttgcacagcatattaagacgaattactttgctgcagaattaatgaatcct
gagaaaggattaactgatgttcttcagaagctgagaactttatcctctgcattgacagat
ctggtcaataaatatttgaatgatgttgatgattcttattctcaacgtgaatctgacttt
tatgatttgctgcatcagatcatgtcacagctgaatgggaaaaactccatttccactttt
gagtttattgagagtggaatagtgaaatctgtagttaattatttatctaatggtcaatat
cttattggcaagactgaaaacgtcagttcacttttctggcagtatagtattgagaagaga
tttgaagtgttcggaagattacttttgtcttcctcagacccatcatttgaggacttacct
tttctatctctaatacgtcaattgcaaagtgcactgtcatcggtggaaaatttccctgtt
atctcaagccacacatccaggctgcggaactcatatgctactataccatatggacgttgt
acctcatacccatgtcttaaagttcagtttgtcaaaggagagggggagacagacctgtgt
gattatttgaaggatattgtgaatgttgatccgttttcatctttggacacaattgaagga
taccttagcccaaaagtgagaaataaaaaaactgagcattcaaaatcaccctctcaagca
atggaggaggaaggatcagcctcacagttgtcacctgatctgagcccttctcaagtacga
actccagatgctgtagaattagacagcatacgttttgatgtgaatcaagttcagctttcc
aagagagagggcgatgacatagcttcatctgccccagtggaaacagcaaatacagagcag
gccaatactgacccaatggatataacagatgttcatatggagtctttggggcagagacag
ttgcatctgtctgaagaaaatagtatcattgcagagtgtcctcaatgcagtaatgaggaa
ggctcgtcaatgaaattgttattctacttggaagggcagaaactaaacaataccttaacg
ttatatcaagctatacttcagcagcaaattgaagcagaaaatgatgcaattactaatgca
aaggtatggaatcaagtccacagaataacatacaagtcatctgtgagacgaaaacaaagt
tgtgcacagaagtgtcatcacgagactcatcattcagctttacatgacaagcatacacca
tggcaacaatacactccatttttcgctaacacctttgcctcggcagtggttgatatagat
agatccaatccaacttatgatattttgtctctccttagaagtttggaacagatgaacagg
ttcagatttcatctaatatctcgtgaacgagtatatgcttttgcagaagagaggaccaat
gacctggataatttgaagtttgattacttttttgtccctcaaactgaatttgtgaacaac
aaattaactgacaaactagaacagcaaatgcgggatccttttgctgtatctgttggtggc
ctgccttattggtgtacccaattaatggattcatgtccctttttgtttggttttgaggca
agatgtaagtatttccgtctggcaatattgggtaaccagccagttcagcaacctcagtta
ccatctaataatagtggaggcctgaatcgtaggcagctatccaatggtggtttcccacgt
aaaaggtttttggttcaccgaaacaagattctggattctgcttcccagatgatggacctc
tatgctagccaaaaggttgtaattgaggtggaatacagcgaagaggtgggaactggtctt
ggtccaaccttggaattttatacattggtcagtcatgagtttcaaaaaagtggtcttggt
atgtggagaggtgactgtatgtcaagtggcaacattagtttagcggatgatgcacatgga
agtcttttgtttgcttttggcctattccctcgcccatggtcacaatctgtgagtgcctta
ggtgaaattgagttttctgaggtgcttaaaaagtttgtccttctgggccaaattgtcgca
aaatctcttcaagatggcagggttctggatcttcctttttccaaagcattttacaaactt
attcttgggaaggagctcagtatatatgatatccagtcgtttgaccctgaattaggaagg
actctactggaatttcatgctcttgctgagagaaaaaaacatgtagaatctctacgtgag
agaaaatcaactctaatgcctgaactatacttccggaataccaaaattgaggatctttgc
cttgacttctctcttcctggctatccagactacatcctcacttctgattcagaaacggtg
gatttgtccaacttagaggagtatgtttcactcatcgtgaatgccaacataggttctgga
gtttccagacaggtggaatctttcaagtctggtttcgatcaggttttccctatcaagcat
cttcaaatattcagtgaagaggaactagagcgtttactgtgcggggaacgtgaaatttgg
aattctaacgagcttgttgatcatatcaaatttgatcatggatacactgccagcagctct
cctgctataaatttattggaaatcatacaagaattcaacattgaaaagcagagagctttc
ctacagtttgtgactggagcacctaggctgcctccgggcggcttggcatctctcaacccc
aagttaacaattgttcgaaagaagtgcagcaaatgggccgatgatgacctccctagcgtg
atgacatgcgccaattatctgaagctgccaccttacactactaaagagaaaatgaaagag
aagctgttatatgccataaccgagggacagggttctttctacctctcttaa
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integrated database retrieval system
