Ipomoea triloba (trilobed morning glory): 116015562
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Entry
116015562 CDS
T07384
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116015562
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116015562
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
116015562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
Prok-RING_1
zf-RING_16
Zf-C2H2_ZNF451_2nd
PRIMA1
Motif
Other DBs
NCBI-GeneID:
116015562
NCBI-ProteinID:
XP_031111528
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All DBs
Position
4:2122063..2123509
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AA seq
366 aa
AA seq
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MSGGYLPPPFFPAINGGGGGGASLPSANNLFQPQQPADPPPAASSSPPSSSSSSASSSII
IVVIVIASAVIVSATIYLILRLLSRRCHRSFRTHDAADDVISSSATAAAATAGAANERRS
APETLESLPLFTFGSVTGNLTGVDCAVCLSKFETHDQLRLLPLCCHAFHAQCIDSWLSTN
QTCPLCRSTVYPTDADILRKILSVSNGRGGGNADPNSGSFRIEIGSVSRRRGDSGPIVGD
SRRSYSVGSSFEYIVDDGYEVSIESIHRRGGSECTDKESIGAPVPEPPGDSLAPDVSGGG
RSWLRDYVDRIASFSLSSRTMSFRGSGRFFTDSGRRSDTVVPIDDDLESGRIGEEISELF
RWLSGV
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggatacttaccgccgccgttcttccccgccatcaacggtggtggtggtggc
ggtgcttcacttccttcggctaacaacctgttccaacctcaacagccggccgatccaccg
cctgcggcttcgtcgtcgccgccgtcgtcctcctcctcctcggcttcgtcgtcgattatt
atagttgtcattgttattgcgtcggcggttatcgtctccgccactatttacctcatcctc
cgcttgctgtctcgccgctgtcaccgctcatttcggacgcacgacgcggcggacgacgtg
atctctagctccgccaccgccgccgcagccacagctggagctgcgaacgagcggcgctct
gctcccgagacgttggagtcgttaccgctgttcacgttcggttctgttacggggaaccta
accggcgtggactgtgcggtttgtttgtccaaatttgagacgcatgatcagttgcggtta
ttgcctttgtgttgccacgcgttccacgcgcagtgtattgattcgtggctatcgactaac
cagacgtgtcctctgtgccggtctacggtgtatccaacggacgccgatattctccgcaaa
attctctcagtctctaatggccgcggcggaggaaatgccgatcctaacagcggcagtttt
cggattgagattggcagcgttagccgccgtcgcggagactccggtcctatcgtcggcgac
agtcggaggtcttactccgttggctcgtcgttcgagtatatcgtagacgacggttacgag
gtgtctatcgagtctatccatcgccgaggaggctcggaatgcactgacaaggaatccatc
ggagctccggtaccagagccgccgggggacagtttggcgccagacgtatccggcggcgga
aggagttggctccgagactacgtcgatcgaatcgcctccttttctctttcctcccgtacg
atgtcgtttcgaggctccgggagattcttcaccgatagcggtcgccggagcgacaccgtc
gtcccgatagacgacgatttggaatccggccggatcggcgaggaaatcagcgagttattt
cggtggctttcaggggtatga
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