Ipomoea triloba (trilobed morning glory): 116015604
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Entry
116015604 CDS
T07384
Name
(RefSeq) uncharacterized protein At3g06530
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116015604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
116015604
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116015604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_At3g06530
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
116015604
NCBI-ProteinID:
XP_031111571
LinkDB
All DBs
Position
4:28289348..28303299
Genome browser
AA seq
2133 aa
AA seq
DB search
MATSIVSQLQAIKSKVLSDSAPQKQPFTRPSVLFSPEKAADYDINTIHSIALSGLDSLIN
TDERFRNYKNDLFSHKSRDLDRELMGIEENNRINASINSYLWLLSGYLELRSAMLTLEYL
IRRYKIHVYNKEELILCALPYHDTHAFVDIVKLIETGNTKWKFLDDVKITCAPPSRKAIV
QQCVRDLGILDVLCDYATRAKKIQPSRPVIGFCTAVVVEVLGSLMTIDNDVVKRVLPYVA
SGLQPHGKGGRDQKAGALMIVSLLAYKVALSPNAVRSLIRSLVDVACSDAKDSTDLRSFR
MSFMALVNLVQLQSVEIIPKKSMGILNEIRDISEFLSGLTEEFNIDKFLGVLLDSLLEYS
SSDDAFHQTLLAIIETVPVKSLLDRIVSKLLNTHLRTFKNSDLTASNTGNLTRQMLVSLY
KKYPSELQKAVHRFLQTKKEASCHETLSQMFDENMEFSHTLIDSKVWFSLEHPKAEIRHS
TILGLDVPSLLNDKAVGSPRFDTIQDAISRRLYDDDLSVVKAVLNVEALSEIVNPSFLLD
AVQNVLWRCIGLLASSPEHKSSLAVDVAVSCLQHAVISCQEIGSFSKKFATLLFPLILIV
PKTHELNVKALRIAKEIKWPLYTNLVSLSEQNKKWDVGCISSVNAENIRILARTFLMHIG
DYLPWLVECCNASELSKTLFFLVLSELLVLPEIGDQFLTLFSTFFPILKTQWELLMSSED
VLSASRFNLGMLDGDHKGFLECMNGTKIKELNADMLICLFWRLLEAFILKAPEDVSLDKS
GKWVSSLQDLLVFFMSQSKYNFKKHCDYIVTKCKIPPSHYLSKLFTEEGHSSAVQIGSLH
SFSYLCAQMDDSLKFQLCAEFPSLLVPLSSDNQDVRMAAMSCIEELLTMWSHVNFSRYRN
GLHTDWVNFLGELLALMVQQKKLIVSDKNVLPSFFTSLLSSSSQSLLVKQDIGKRFDQTT
KHNILAFILLSALGLSAYAKLRILLLLKGLGSRVMRIASVKSFLRDLLEMRHQYLLGYDK
SYPKLSKVEVNVLCLLLDICATPSTSADDFKDLILKALQFSAVPSEDPAIVEPCITALRN
LTNSHYGVLDTTTQKQLFRDLVCLFRSANSEIQNASKGALLRINISCSIVSSMLDLISNQ
NINSICSAHAKRKRKEAIHQDFDACDDSNLKLEDPCAFTSSLLDVLLLKKNMKNRISLVG
PLFKLLHKIFMDNDWTLLLRSSSQTTSSTVIHIQQTALLLLEDIATSITFKDDDGVEFKL
ELLIRCARLASDALTRNHVLSLLSTILKVMPNRVLGNISDIRIIVGETAVTQWDSYSQRV
FENLISAIVPCWLSKYSMDALLKIFVDFLPEVSEHRRLSIITHLLKNLGENTSLGSLFFL
LFCSVISRKSLSCTSDANPSLGYITSTISMEWEYAFAVLLSEQYPCTVWLPSIAILLQKI
GIDCESEELFMVLVVAEHFVSNKLQDPEIAFMLDSGDVSESIQPTIGVILEKMVSHLQLV
ESNGKQMSAPLIRKELKERIRSVLKAIAKCLRPSIYFKIVIQLLGHADINVKKKALGILC
DTVKATGVIDAKRGKKELTSTSRNSWTHLDEDSLEVFNTMCLVILKFIDDPASDSSTQLK
LAAITTIEVLAIRFPSDNSVFHLCLASVCKSICADNSAVSSGCLRTTGALVNVLGPKALP
ELPCIMDNLIRKSRDFSNSLTSISDETDSRSIASSELSGSLFMSILVSLEAVVDKLGGFL
SPYLGYILKLLVLCPQYTSTTEEKLKSKADDIRRLIASKVPVRLSLPPLLEIYSNAISYG
DCSLSITFKMLGDLVTTMDRPSIGENHAKIFDKCLQALDLRRQRKTSVKNIELVEKNVIN
TMVVLTMKLTETMFRPLFMKSIEWSGSNVDDNEIRRPNDRTISFYGLVNMLAERHRSLFV
PYFKYLLDDCVRHLTDAEDGKIVVAPKKKKAKLQEVNKKDAGCGLSVEMWHLRALILSSL
QKCFLYDTGNQKFLDSSNFQVLLQPIVLQLDVDPPSLLEQHPSVPSVKEVDDLLVACVGQ
MAVTAGSDLLWKPLNHEVLMQTRSERIRSRILGLRIVKYVVEKLKEEYLQFLAETIPFLG
ELLEDVEVPVKSLAQEILKELESMSGESLAQYL
NT seq
6402 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctcaatcgtttcacagcttcaggcaatcaagtctaaagtgctatcggattca
gcgccgcagaaacaacccttcacacggccctcagtcctattcagcccagaaaaagctgct
gactacgacataaacaccattcatagcatcgctctctcaggtctggattccctaataaac
actgacgaaaggttccggaattacaaaaatgacttatttagtcacaagagtagagatttg
gatagagagttgatgggcattgaggaaaacaacagaatcaacgcatccatcaattcatat
ttgtggttattgtctggatatcttgaattgcgttcggccatgctgacactagagtatttg
attcgaagatacaagattcatgtctataataaggaggagttaattttatgtgccttgcct
taccatgatacccatgcatttgttgacattgtgaaattaatagaaacaggaaacactaaa
tggaaatttcttgatgatgttaagatcacttgtgcaccaccttccaggaaggctattgtg
caacaatgtgtccgtgacttggggattttagatgttttgtgcgactatgcaacaagagca
aagaagattcagccatctagacctgtaattggcttttgtacagcagtggttgttgaggtg
ttgggctcgctaatgaccatagacaatgatgtggtaaagagagttctaccatatgttgct
tctggacttcaacctcatggtaaaggaggacgtgatcaaaaggctggtgccttgatgatt
gtcagcttgctagcttataaggtggccctgtcccctaatgctgtcagaagcttgattcgc
tccctagtagatgtggcttgcagtgatgcaaaggattcaactgacttacggtcgtttcgc
atgtcttttatggccttagttaaccttgtccagttgcagtctgttgaaataattccaaag
aagagcatgggtattctaaacgagatcagggatatatcggaatttctcagtgggctgaca
gaagagttcaacattgacaaattcttgggcgtgctcttggactcccttcttgagtacagt
tcttctgatgatgcattccatcagactttattagccataattgagactgttcctgtgaaa
agcttacttgatcgcatagtctcaaagctgctaaatacgcatttgaggacatttaaaaac
agtgatttaactgcctccaacacaggaaaccttaccaggcagatgttggtatcattatat
aagaagtatccatctgagttgcaaaaagcagttcacagattcctacagaccaagaaagag
gcgtcctgtcatgaaacactaagccagatgttcgatgagaatatggagttttcacataca
ttaattgattcaaaagtttggttttccttggaacatccaaaggcagagattcggcattcc
accattttgggtctggatgtgcccagtttgctaaatgacaaggctgttggttctccgagg
tttgatactattcaagatgcaatatcacggaggctttacgatgatgacctaagtgttgtt
aaggcagttttaaatgtagaggcactgtctgaaatagtaaatccttcatttcttcttgat
gcagtccagaatgtgctttggagatgcattgggcttttagcatctagtccagagcacaaa
tcttctctagcagttgatgttgctgtgtcttgccttcagcatgctgtgataagttgccag
gaaattggctcattttccaaaaagtttgcaacactacttttccccttgatcttgattgtt
ccaaagacacatgaattaaatgttaaggccttgagaatagccaaggaaataaagtggcct
ttgtataccaatcttgtctctttgtcagagcagaataagaaatgggatgttggatgcata
tcctcagtaaatgcagaaaatatccgcatattggcaagaacattccttatgcatattgga
gattatctgccttggctggttgaatgctgcaatgcgtcagagctgtcaaagacattgttc
tttttggttttatcagaattacttgtgttgccagaaataggggatcaatttttaacattg
ttcagcactttctttccaatactaaaaactcagtgggaactattgatgtcttcagaggat
gttttatctgcaagccggtttaacttgggcatgttggatggagaccacaaagggttcttg
gaatgcatgaatggaactaagataaaagaattgaatgctgacatgcttatctgtttgttt
tggaggttactcgaggcttttattttaaaagcaccggaagatgtatctttggacaagagt
gggaagtgggtatcctctcttcaggatctacttgtctttttcatgtcccaatcaaaatat
aatttcaagaaacactgtgattacattgttacgaagtgcaagatccctccatctcactat
ctttcaaaactctttacagaagaaggacattcatctgctgtccaaattgggagtcttcat
tctttttcatatctttgtgcgcaaatggatgacagccttaagtttcaactatgtgctgaa
tttccttcacttcttgttccattatcaagtgataatcaggatgtgcggatggcagccatg
agctgtattgaagagcttctcactatgtggtcacatgttaatttctcccgatatagaaat
ggccttcatactgactgggttaatttccttggagaattgttggccttaatggttcagcag
aagaagctaatagtctcagacaagaatgttctcccatccttctttacatccctgctaagc
tcctccagccagagccttttagtaaaacaggacattggaaagagatttgatcagaccaca
aaacataatattttagctttcattttactatctgctctaggactttctgcctatgcgaag
ctaagaattctgttattgcttaaaggcttgggaagtagggtaatgcgtattgctagtgtt
aagtcatttcttcgtgatcttctggaaatgcgccaccaatatcttcttgggtatgacaag
tcataccctaaattgtcaaaggttgaagttaacgttctttgccttctgttggatatctgt
gctaccccttctacttccgcggatgactttaaagacctgatattgaaggctttgcagttc
agcgctgtgccatctgaagaccctgctattgtagagccctgtataactgctctgaggaat
cttaccaattcacattatggagttttagataccacaactcagaagcaactctttcgagac
cttgtgtgtctgttccggagtgccaatagtgaaatacaaaatgctagtaaaggggctttg
ctgcggattaatattagttgctccattgtttccagcatgcttgatttgatatcaaaccag
aacattaacagtatatgctctgcacatgcaaagagaaaaagaaaggaagcaatccatcaa
gattttgatgcttgtgatgattcgaatcttaaattagaggatccatgtgcttttactagc
tctctactagatgttttactgttgaagaaaaatatgaagaacagaatatctcttgtgggt
ccgttgttcaagcttcttcataagatctttatggacaatgattggacacttttgctaaga
tcttcttctcagactacttctagtactgtaattcacattcaacaaacagcactcctactg
ttagaagatattgctacttcaatcacattcaaggatgacgatggtgtagaatttaagttg
gaattgctaatcagatgtgcccgtcttgcaagtgatgctttgacccgcaatcatgttttg
tcattgttatcgactattttaaaggtcatgcccaacagagttttgggaaacatttcagat
attcggattatcgtgggggaaactgcagttacacagtgggacagttattctcaacgtgtc
tttgaaaacctcatttctgctattgtgccatgttggttgtctaaatacagtatggatgca
ttgctaaagatctttgtggattttctgcccgaagtgtctgaacatcggaggctttcaatt
attacgcaccttttgaagaacttaggcgagaatactagtttgggatcacttttcttcctc
ctcttctgttctgtcatctcaagaaagagtttgtcttgcactagtgatgccaatccttct
ttgggttatataacctctacaattagtatggaatgggagtatgcatttgctgttttgttg
tccgagcaatatccatgcacagtatggcttccctccattgccattctgcttcagaaaata
ggaatagattgtgaaagtgaagaattgtttatggtcttggtagttgcggagcattttgtt
tcaaataagctgcaagatcctgaaattgcttttatgcttgattctggagatgtctcagaa
agcattcagccaacaattggagtaattttggaaaaaatggtctctcatctgcaactggtg
gaatccaatggaaagcagatgagtgctcctctaatcaggaaggaactgaaggagcgcata
cgctctgtcttaaaggcaattgcaaagtgcctcagaccatcaatatacttcaaaattgtt
atacaattacttggacatgcagatattaatgtcaaaaagaaggctcttgggattttgtgt
gacactgtgaaggccactggtgtcatagatgccaagcgtgggaaaaaagaactaacttca
acctcaagaaattcatggactcaccttgatgaggattctttggaagtctttaacacgatg
tgtttagtaatattgaagtttattgatgatcctgctagtgactcaagcactcagttgaaa
ctggcagcaattacaacaattgaggttttagctatcagattcccttcagataattcagtc
ttccacttgtgccttgcatctgtttgtaaaagtatttgtgcagacaattctgccgtctct
tcaggttgccttcgtacaactggtgccttggtcaatgtgttgggcccaaaggcactacct
gagcttccatgtatcatggataacctgatacggaagtctcgtgatttctctaattctctg
acatcaatttccgatgaaactgatagcaggtctattgcatcatcagaactaagtggctct
ctatttatgtctattcttgtttccttagaagcagttgtagataagctaggtggtttcttg
agtccatacctggggtatattcttaaacttcttgtattatgtccgcaatatacatccaca
acagaagagaagttgaagtcaaaagctgatgatatacgaaggctcatagcgagtaaagtc
cctgttcgcctttcccttccacctttgttggagatctactccaatgctattagttatggg
gattgtagtttatctattactttcaaaatgcttggggacctggtcactacaatggacaga
ccatctattggtgaaaatcatgcaaagatttttgacaagtgtttgcaagctcttgatctt
cgccgtcagcgcaagacttctgttaaaaatattgagcttgttgagaaaaatgtaattaat
acaatggtggttctcacgatgaagctgacagaaactatgttcaggcctcttttcatgaag
agtattgaatggtcaggctcaaatgtggatgataatgaaataaggaggccaaatgatcgc
actatttctttctatggcttggtaaacatgttggctgaaagacatcggtcattgtttgtt
ccatacttcaagtatttgcttgacgactgtgtaagacacctgactgatgctgaagatgga
aaaattgttgttgccccaaaaaagaaaaaggccaaacttcaagaagtgaacaagaaggat
gcaggatgtggtttatctgttgaaatgtggcatttaagagcactgattttgtcttcgctg
caaaaatgttttctttatgacactggaaaccagaaatttcttgactcttccaattttcag
gtcctattgcagcctattgtgttgcagctagacgtagatccaccaagtttgttagagcag
catccaagtgtgccatccgtgaaggaagtcgatgacttgttggttgcatgtgttggtcaa
atggctgtcactgctgggtctgacctcctgtggaagccattgaaccatgaggtgttgatg
caaactcgaagcgaaagaattcgtagccgcatattggggttgagaatcgtcaagtatgtg
gtggagaaattgaaagaagaatatttacagtttttggcagaaacaattccattccttggt
gagctgctggaggatgtagaggtacccgtgaaatcccttgcacaagagattctaaaagag
ttggaatcaatgagcggagaaagccttgcgcagtacttgtga
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