Ipomoea triloba (trilobed morning glory): 116015670
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Entry
116015670 CDS
T07384
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116015670
Membrane trafficking [BR:
itr04131
]
Protein recycling
Others
EARP complex
116015670
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
116015670
NCBI-ProteinID:
XP_031111670
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Position
4:34012299..34030639
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AA seq
1109 aa
AA seq
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MQSNSLPFPLIPLTLFNGGELSEGGFELSRYLFLGSLLFSSPGGTAGGMDLSKVGEKIFS
SVRSARSLGLLPASPSDRPEVPARAAAAAAVARVLAGLPPHQRHNLSSSSEELSSEELSS
IYGSKPSKVLDDLEEEFYEEDFDPVRHVLEHIPTDENELAYFEEKAASRLAQLDRIAERL
SRHVMQHHEVMVKGMNLVRELERDLKVANVICMNGRRHLTSSRNEISRDLIVHRNSKKKQ
ALLDMLPILTELRHALDMQVALETLVEEGNFSKAFQVLSEYLQIMDSLSQLSAVQEMSHG
VEVWLGKTLQKLDALLLGVCQDFKEESYTTVVDAYALIGDVSGLAEKIQSFFMQEVLSDT
HSVLKTLVQKDFENTNVQGARLTYSDLCIQMPESKFRQCLLATLAVLFKLMCSYHAILSF
QPVDKKQGEVFALAGDIQHVGTIAQTPVVSSTGEMPATCVSLTDNIAAFHPSNIDNGEEV
RDGGETASSSGSPWFQLRKDAATFVSQTLHRGRRNLWQLTTSRVAVLLSSPVVCSTSIHQ
FLTMYEDLNTFILAGEAFCGSEAVEFRQKVKFVCESYFASFHRQNIYALKLVLEKENWLI
LPPEVTQVVSFAGLIGDGAALIASTSNSLDTRLGHAHKSNDLAQTNSKRSGFSNWLKNEN
PFLVKLNCSSNEYTDSYFPGSPSSREVGSSNGSYFKKDSTQENHAENHMNGSPSLSEDEN
EDLHADFIDEDSQLPSRISKPSRSRHRSTLSNDEEMTAQTGSSLTLLRLMDKYARLMQKL
EFVNVELFKGISQLFGIFFHFVFESFVNQSTLPGGKVLTDMLPHKLKTALSRITQDCDQW
MKPQSSPFNSSSPTSSNTPFTHMDVTPTSPPSLLAGASFSLKERCAGADTISLVARLLHR
SKAHLQSMLLKKNSATVEDFYVHLVDVVPDLVEHIHRTTARLFLHINGYVDRIANAKWEL
KDLGLEHNGYVDLLLGEFKHYKTRLVTGGIQKEVQDLLLEYGLDNVAETLVEGLSRVKRC
TDEGRALMSLDLQVLINGLKHFVSVDVRPKLQIVETFIKAYYLPETEFVHWSRAHPEYSK
SQVVGLVNLVATMKGWKRKTRLEVLEKIE
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccaactcgctgcctttccctctgattccgcttacgttgttcaatggtggtgaa
ttgagcgaaggcgggtttgagctttccaggtatttgttcttgggctccctgctcttctca
tccccaggcggtactgctggcggcatggacttgtctaaggttggagagaagatcttcagt
tccgttcgctccgcccgatctcttggccttcttcctgcttctccttccgatcgccctgag
gttccagcacgagctgcagcggcagctgctgttgcacgtgttcttgctggactacctcct
catcaaaggcataatctttcatcaagctctgaagaattaagctctgaagaattaagctca
atatatgggagcaaaccttccaaagtgttggatgaccttgaggaagaattttatgaagag
gattttgatcctgtaaggcatgttttggagcatattccaactgatgagaatgaactggca
tattttgaagaaaaggctgcttctagattagcacagttggatagaattgctgaacgcctt
tcacgccatgttatgcagcatcatgaagtaatggtgaaaggaatgaatcttgtcagggaa
ttggaaagagacttgaaagttgcgaatgttatttgcatgaatgggcggagacatcttaca
tcatcaaggaatgaaatatcaagggatcttattgtgcacagaaattctaaaaagaaacaa
gcgcttttggacatgctccccatcttaacggagctccgccatgcactggacatgcaagtg
gctcttgaaactcttgtagaggaaggaaacttctctaaggcattccaagtactctctgag
tatttgcaaattatggatagtttatcacaactttcagcagtacaagaaatgagccatggt
gttgaggtgtggttgggaaagactcttcaaaagttggatgcacttttattaggagtatgc
caggatttcaaagaggagagctatacaactgtggttgatgcttatgcactaatcggggat
gtttctggacttgctgaaaagatacaaagtttctttatgcaggaggttctctctgataca
cacagtgttttgaagactcttgtgcaaaaggactttgaaaataccaatgtgcaaggtgca
aggctcacatacagtgatctgtgcattcagatgcctgaatccaaatttaggcagtgtttg
ttggcaaccctagctgtattatttaagttgatgtgttcatatcatgcaatcttgagcttc
cagccagtggataagaagcagggtgaggtttttgcacttgcaggggacattcaacatgtt
ggtacaattgcacaaactccagttgtatcctccactggagagatgccagcaacctgtgta
tctttgacagataatattgcagcttttcatccttcaaatatagataatggtgaagaggta
agggatggtggagagacagcatcaagcagcggatcaccctggtttcagctgcgtaaggat
gctgcaacttttgtttcacaaaccttacatagaggccggaggaatctctggcaacttaca
acaagtcgtgtagcagtgttgctttcgtctcctgttgtgtgctctacaagtattcatcag
ttcctaacaatgtatgaagatctgaatactttcatcttggctggggaagctttctgtggg
agtgaagcagttgaattcaggcagaaagtaaaattcgtttgtgaaagttattttgcttct
ttccatcggcagaacatatatgcactgaaattggtgctggaaaaggagaattggctgata
ttgccaccagaagtaacacaagtagtaagttttgctggtctcattggtgatggagcggca
ttgattgcttcaactagtaactctctcgatactcgattggggcatgcccataagtcaaat
gatcttgcccaaaccaactctaagaggagcggattttcaaattggctgaagaacgagaac
ccctttttggtgaaattgaattgtagttcaaatgagtacactgattcttattttcccgga
tcgccatcttctagagaagttggaagctctaacgggagttatttcaaaaaggattctact
caagaaaaccatgctgaaaatcatatgaatgggagtccttctctatcagaagatgaaaac
gaagatcttcatgctgattttattgatgaagatagtcaacttccaagccggatttcaaag
cctagtcgttcaagacatcgttctacactttcgaatgatgaagaaatgacagcacaaaca
ggatcgtctcttactctcttaaggttaatggataaatatgcaaggctaatgcagaagctg
gagttcgtaaatgttgagttgttcaagggaattagccaattgtttgggatcttttttcac
tttgtatttgagagctttgtcaatcagagtactctccctggtggaaaggtcttgacagac
atgcttcctcacaagctaaagactgcattatcaagaataacacaggattgtgaccaatgg
atgaaaccacagtcttcaccatttaattcatcttcacccacatcttcaaatacaccattc
actcatatggatgtcactcctacaagtccaccaagtctcttagctggtgcatcttttagt
ctcaaggaaagatgtgccggtgctgacactatatctcttgttgctcgattgttgcataga
tctaaagctcatcttcagtcaatgcttctgaaaaaaaattcagcgactgttgaagatttt
tatgtgcatttggtggatgttgtaccagaccttgtagaacatattcacagaacaactgcc
aggctatttctccacataaatgggtatgttgataggattgctaatgctaaatgggagttg
aaagatcttggattggagcacaatggatatgtagacttgctgctgggagaatttaaacac
tacaaaacgaggcttgttactggaggaattcaaaaggaggtccaagacctcctcttagaa
tatggactagataatgttgctgaaactcttgttgaaggcttatctagggtgaagagatgc
actgatgaggggagagctctcatgtcactagatcttcaggtattgatcaacggcctaaag
cattttgtttccgtagatgtgaggccaaagttacagatagtcgagactttcatcaaggcc
tactaccttccagaaaccgagtttgtgcattggtcacgcgctcatccagaatacagtaaa
agccaagtagttggtctagtcaaccttgttgccaccatgaaaggttggaaaagaaaaacc
aggcttgaagtgttggagaagattgaataa
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