Ipomoea triloba (trilobed morning glory): 116016242
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Entry
116016242 CDS
T07384
Name
(RefSeq) uncharacterized protein LOC116016242
Organism
itr
Ipomoea triloba (trilobed morning glory)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_2
Retrotran_gag_2
rve_3
HrpB7
DUF1664
rve
ATG16
SlyX
COG2
zf-C2H2_10
Sec8_N
PspA_IM30
Motif
Other DBs
NCBI-GeneID:
116016242
NCBI-ProteinID:
XP_031112259
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All DBs
Position
4:complement(36157555..36164867)
Genome browser
AA seq
1669 aa
AA seq
DB search
MQQVLTRFEELRMKDEETIVEFNARVQELKNEAVVLGEPFSSDKLVRKILQSLPVRFRMK
VTAIQESIGWETKSVAELMSNLRTYEMDILSQDNNSKRGKNVAFIAEECDSEEECEELDD
ESVAMITRNFTKILKQINRRNRGGKNQQNRSNSAAPSSSNSSRTVGKSSNLNQQKNFGQS
NQFGQNQNLTRKNQWQQGEVRNKNKGIQCRECEGFGHIQVECATYLKRKKSMKATTWSDE
KRKKSMKATTWSDEERKKSMKATTWSDEECSKSMKATTWSDEECSEEAQDEDEEISGNFV
EAQDEDEEISGNFVAFTAVVTEPNSDLDNDSDQEDVDKIPYEELEQSYIKLYKKWDILLK
THTTTNSKNEFLEKNIESLKKQVADTNAELSESNSKVMKLSAELEAYKKQIQMMNTTSTL
NQILDSGRSPNVRNGLGYTQNSQNSFTTKFVPAGTSTWTNAETHQKTLRKYNPTCHYCYK
KGHTRPECYRFYSDQRTDKFQKKWITPVSRQVWVRKSDLVCYSILLGKEQGKWYFDSGCS
RHMTGSKEFFKNVIPYTGQVTFGDGIKGDIMGIGILNVAGLPSLSKVLLVQGLKANLISI
SQLCDQKLNVGFTKDRCIVKDKLNKVIMEAGKANQNPTQTFQSYRNLFVSGSSAYGPNRT
NTGGKFGRNKSETFEHFEKLCLKLQKEKGLHIGKIVRIRSDHGLHIGKIVRIRSDHGREF
ENQHFSTFCSKNGISHQHFSTFCSKNGISHEFSAPICSKNGISHEFSAPKCSKNGISHEF
SAPKTPQQNGVVEFSAPKTPQQNGVVERKNRTIQEMARVLINSKNLPQFFWAEAVHTACH
IINRVYLRPGMSHTPYELWRGRKPNLKYFRIFGSRCYILNDREKVGKFEPKSDEGIFLGY
SPNSRAYRVYKKRIKTVQESVNVIVDDQLQPVGNYLPAADLEQNQTKTTDEKGVKKQNQT
KTTDEKGVKKSESTKTTDEKGVKKSESDSELDDSDPDTEQSDSELDDSDPDTEQYQRKLD
DSDPDTEQYQRKSDDEKGIKKSELKSESEDLKSPTKQQPNVGNHPSTLSKQVPTHVQKNH
PAENILGTPTAGVRTRGMLRGSLAELSGYACYTSKFEPKNYKEALQDEVWIRAMQDELAQ
FESWIRAMQDELAQFERWIRAMQDELAQFERKIRAMQDELAQFERNIRAMQDELAQFERN
EVCMQDELAQFERNEGNVARNKARLVAQGYSQVEGIDYEETFATVARLESVRLLLAVSCI
LNFQLNQMDVKTAFLNGLLNEEIFVAQPKGFENPHHPNYVYKLKRALYGLKQAPRAWYER
LTQYLLKNGYTRGGADKTLFVKKTTGHITVAQVYVDDIVFGSTSPANVKEFIQVMEKEFE
MSMIGELTCFLGLQVKQMETGLFLSQTKYAQNLVKRFGLDSAKEAKTPLSTTLKLSKDSN
SKPVEGKLYRSMIGSLLYLTASRPDIMFSVGLCARFQANPREAHLNAVKRIIKYVKGTVN
YDLWYSRDSGTELLGYSDADWAGNLEDRKSTSGGCFFLGKNLVSWFSKKQNSISLSTAEA
EYIAAGSCCTQLIWMKQMLNDYGLKFSSADLHCDNTRAINIAKNPVQHSRTKHIDIRHHF
IRDLVESGDIKMHYIPTDKQLGDIFTKALDPTRFNILKSELGMCNGPPN
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagtcctcaccagatttgaagaattacgaatgaaagatgaagaaaccatcgtc
gaatttaatgctagggttcaagagttgaaaaacgaagctgtcgtattgggggaaccattc
tcctcggacaaactggtcaggaagatccttcaatctcttcctgtacgcttcaggatgaaa
gtcacagcaattcaagaaagcataggctgggaaacgaaatctgttgcggaactgatgagc
aatctaagaacatacgaaatggatattctatcgcaagacaacaattcaaaaaggggcaag
aatgttgcgtttattgccgaagaatgtgactcagaagaagaatgtgaagaattggatgat
gaatctgtggcaatgataacaagaaatttcaccaagattctcaaacaaataaatcgaaga
aacagaggaggcaagaatcaacaaaacagatccaacagtgctgctccatcctcgtctaac
tcatcgcgaaccgtcggaaaatcgtcaaatttgaatcaacagaaaaactttggtcaaagc
aatcaattcggtcaaaatcaaaacttgactcgaaaaaatcaatggcagcaaggggaagtt
aggaacaaaaacaaaggaattcagtgcagagagtgtgaagggttcggacacattcaagtg
gaatgtgccacttaccttaaaagaaagaagtccatgaaggcaacaacctggagtgatgaa
aaaagaaagaagtccatgaaggcaacaacctggagtgatgaagaaagaaagaagtccatg
aaggcaacaacctggagtgatgaagagtgttctaagtccatgaaggcaacaacctggagt
gatgaagagtgttctgaagaagctcaagatgaagatgaagaaatatctggaaacttcgta
gaagctcaagatgaagatgaagaaatatctggaaacttcgtagccttcactgcagttgtt
actgaacctaattcggatttggataatgattcagatcaagaagatgtagataaaatacct
tatgaagaacttgaacaatcctacatcaaactgtacaagaaatgggatattctcttgaag
actcacacaaccacaaattcaaaaaatgagtttcttgaaaagaacattgaatccctgaag
aaacaagttgctgatacaaatgctgaactgtccgaatccaactccaaagtgatgaagctc
tcggcagaattggaagcttacaagaaacagattcaaatgatgaacacaacatcaactctc
aatcaaatccttgactccggaagatcacctaacgttcgaaatggtttggggtacactcaa
aactctcaaaattctttcactactaagtttgtccctgcaggtactagtacttggacaaat
gctgaaacccaccagaagactttgaggaaatataatccaacatgtcactactgctacaag
aaaggccacacgagaccagaatgttacaggttctatagtgatcagagaactgacaaattt
caaaagaaatggatcactccagtcagtcgtcaagtttgggtaagaaaatctgatctagtt
tgctactctatccttcttggaaaagaacagggaaaatggtatttcgacagtggctgctct
aggcatatgactggcagtaaagaattcttcaagaatgtaattccatatactggacaagtg
acctttggtgatggaattaagggtgacatcatgggcattgggatcctcaatgtagctgga
ctgccctcactatcgaaggtactgctggtacagggtcttaaagcaaatctgatcagcatc
agccaattgtgtgaccaaaagttgaatgtagggttcacgaaagatcgatgcattgttaag
gacaaactgaacaaagttattatggaagctgggaaagcaaaccagaaccccacacaaaca
tttcaatcatataggaacctcttcgtgtctggatcttctgcatatggacctaatcggacc
aacacaggtggaaagtttgggagaaacaaatcagaaacctttgaacattttgagaaactg
tgcttgaagctacaaaaagaaaagggtctgcatattggtaaaattgtgaggattaggtca
gatcatggtctgcatattggtaaaattgtgaggattaggtcagatcatggtagggaattc
gaaaaccagcacttctcaaccttctgctccaaaaatgggatcagccatcagcacttctca
accttctgctccaaaaatgggatcagccatgaattctcagccccaatctgctccaaaaat
gggatcagccatgaattctcagccccaaaatgctccaaaaatgggatcagccatgaattc
tcagccccaaaaaccccccagcaaaatggagtagttgaattctcagccccaaaaaccccc
cagcaaaatggagtagttgagcgaaaaaacagaaccatccaagaaatggctcgagtcttg
ataaacagcaaaaaccttcctcagttcttttgggcagaggcagttcatactgcttgtcat
ataatcaacagagtgtatcttagacctgggatgtcgcatacaccatatgagctgtggcga
ggaaggaaaccaaatttgaagtactttcgcatttttggcagtagatgctatatcctaaat
gacagagaaaaggttggaaaatttgaaccaaagagtgatgaaggcatattcttagggtac
tcaccaaatagtcgagcctacagagtctacaaaaagcgtatcaagactgtccaagaatct
gtcaatgtaattgtagacgatcaactgcaaccagttggaaattatctaccagctgctgat
cttgagcagaaccaaacaaaaacaactgatgaaaaaggagtcaagaaacagaaccaaaca
aaaacaactgatgaaaaaggagtcaagaaatctgagtcaacaaaaacaactgatgaaaaa
ggagtcaagaaatctgagtcagactctgaactagatgactccgatccagacactgaacag
tcagactctgaactagatgactccgatccagacactgaacaataccaaagaaagctagat
gactccgatccagacactgaacaataccaaagaaagtcagacgatgaaaaaggcatcaag
aaatctgagctaaaatcggaatcagaggacttaaaatcacccactaaacaacagccaaat
gtaggtaaccatccatctacactgtcaaagcaagttcccacacatgttcaaaagaatcat
cccgctgagaacatattggggacacccaccgccggtgttcgaaccagaggaatgctaaga
ggcagtctagctgagttatctgggtacgcgtgttacacatcaaaatttgaacccaagaat
tacaaagaagcacttcaagatgaagtctggataagggctatgcaggatgaacttgctcaa
tttgagagctggataagggctatgcaggatgaacttgctcaatttgagagatggataagg
gctatgcaggatgaacttgctcaatttgagagaaagataagggctatgcaggatgaactt
gctcaatttgagagaaatataagggctatgcaggatgaacttgctcaatttgagagaaat
gaggtatgtatgcaggatgaacttgctcaatttgagagaaatgagggaaatgtggccaga
aacaaggccagactggtggctcaaggatactcacaagttgaagggattgactatgaagaa
acgtttgccactgtggccagacttgagtcagtcagattactgttggccgtctcctgcatt
ctgaactttcaactgaaccagatggacgtaaagaccgcctttttgaatggacttctcaat
gaggaaatcttcgtagctcaaccaaaaggatttgagaatccacatcatcctaattacgta
tacaaactgaaaagggccctttatggtctgaaacaggcaccaagagcatggtatgaacga
ctcacccaatatcttctgaaaaatgggtacactcgcggtggggcagacaaaacactgttt
gttaaaaagaccactggacatataactgtggcccaggtttatgtagatgacatcgttttc
ggctcaacatcccctgcaaatgttaaggagttcattcaagtcatggaaaaggaatttgaa
atgagcatgataggggaactgacatgcttcttgggtctacaagtaaaacagatggaaaca
gggttgtttctgtcacaaaccaaatatgcccaaaacttggtcaaaagatttggtcttgac
tctgctaaggaagctaaaacacctctttccacaacgctaaaactatcaaaagactccaac
tcaaaacctgttgaaggcaaactctatcgaagtatgattggcagtctactgtacttaacg
gcaagcagacctgatataatgttcagtgtaggtctgtgtgcacgcttccaagcaaatcca
agggaggcacacttgaatgcagttaaaagaataatcaaatatgttaaggggactgtgaat
tatgatctatggtattcgcgtgactcaggaactgaactacttggatacagcgatgctgac
tgggcaggaaatctggaggacagaaaaagtacatcaggagggtgttttttcttaggaaaa
aaccttgtttcatggttcagcaagaagcaaaactcaatctcattatctacggcagaagct
gaatacatagctgctgggagttgctgcactcaacttatatggatgaaacagatgctgaac
gattatggcctaaagttcagtagtgctgatcttcactgcgacaacaccagagctatcaat
attgcaaaaaaccctgtccagcattcccgcactaagcatatagatatcagacatcatttt
atcagggatcttgtggaaagtggagacataaaaatgcactacataccaacagacaaacaa
ctgggagacatattcacaaaggcactggatccgaccagattcaacatcctaaaatcagaa
ctcggcatgtgtaatggcccaccgaactag
DBGET
integrated database retrieval system
