Ipomoea triloba (trilobed morning glory): 116016261
Help
Entry
116016261 CDS
T07384
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00750
Vitamin B6 metabolism
itr01100
Metabolic pathways
itr01240
Biosynthesis of cofactors
Module
itr_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
116016261
Enzymes [BR:
itr01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
116016261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NMO
NanE
His_biosynth
OMPdecase
Motif
Other DBs
NCBI-GeneID:
116016261
NCBI-ProteinID:
XP_031112286
LinkDB
All DBs
Position
4:complement(32041494..32042734)
Genome browser
AA seq
310 aa
AA seq
DB search
MSGSGVVTVYGNGAIAETAKQSPFSVKVGLAQMLRGGVIMDVVTAEQARIAEEAGACAVM
ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEALGIDYVDE
SEVLTLADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRH
VRSVMGDIRVLRNMDDDEVFTFAKKIQAPYDLVMQTKQLGRLPVVQFAAGGVATPADAAL
MMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEVLAEVSCGLGEAMVGINLNDA
KVERYANRSE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaagtggtgtcgtaaccgtctatggaaacggcgctatcgccgagacggccaag
caatcccccttctccgtcaaggtagggctcgcccagatgctccgcggcggcgttatcatg
gacgtcgtcaccgccgagcaggcgcgcatcgccgaggaagccggcgcgtgcgccgtcatg
gcgctcgagcgcgtccccgccgacatccgcgcgcagggcggcgtggcccgcatgtccgac
ccgcagctgattaaggaaatcaagcaggcggttacgattccggtgatggcgaaggctcgg
attgggcacttcgtggaggcgcagattctggaggcgctcgggattgattatgtggacgaa
tcggaggttttaaccctagcggatgaagagaatcacatcaataagcacaatttccgtatc
ccttttgtgtgtggttgccggaacctgggcgaggccctccgccgcatccgcgagggggcc
gccatgatccggactaagggcgaggcggggaccggcaacgtcatcgaggccgtccgccac
gtccgctccgtcatgggcgacatccgcgtcctccgcaacatggacgacgacgaggtcttc
acattcgccaagaagattcaggccccctatgaccttgtcatgcagaccaagcagctggga
aggctccccgtcgtccaattcgccgccggcggggtcgccactcccgccgacgccgcccta
atgatgcaactcggctgcgacggcgtgttcgtcggctccgggattttcaagagcggcgac
cctgccaggagagcccgcgcaatcgtccaggccgtcactcactacagcgaccctgaagtt
ctcgccgaagttagctgcggcctcggcgaggctatggtagggatcaatctcaatgatgct
aaggttgagaggtacgcaaaccgttccgaatag
DBGET
integrated database retrieval system
