KEGG   Ipomoea triloba (trilobed morning glory): 116016285
Entry
116016285         CDS       T07384                                 
Name
(RefSeq) uncharacterized protein LOC116016285
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116016285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:itr03041]
    116016285
Spliceosome [BR:itr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    116016285
 Complex B
    116016285
SSDB
Motif
Pfam: RRM_1 RRM_occluded RBD_DEAH11
Other DBs
NCBI-GeneID: 116016285
NCBI-ProteinID: XP_031112330
LinkDB
Position
4:complement(8567307..8574434)
AA seq 984 aa
MGRSSLGKEMNASNNASSQSKSDEGTSARTRPFTCAEIMLRRKNKKDIEEIKDSSVGAAV
VLDKENSVNRTFDSLGSDRYCDVSIPSSVRHNSKDSQLTSRREESDDKARKVARFKKKEI
RETETKRGEAVSNDTSGKNISGYKIDRAPHGGRTKDDKSNDGSKNKHGNKHVNDLARKDI
LTDKGSKIYEKERKEKHHDKDSRQVYRKRTNDELPSNASEDESEKRHSRNYSSTNRYKGK
NKEKSEKETKRKHQHEDEEKAKDRNADKKHDSSKLRVSEFPEKKDSKRSHHEDLRQKRRR
SRSRERDKESHRKSRSPSPKAHKHSSHDVRDRTETYSHSSKDKSGRSNSDFDKKRISNNG
ETAHYKRHSGSASGLGGYSPRKRKSEAAAKTPSPTSRSPERRIAGWDLPPAATEKNIPAP
VLSSLPSSSQSVSLSTLESFVVAPGSLFATKPAVFFPNSYPPLVHAVESIQLTQATRPMR
TLYVENLPNSASDKDVMECFNKFLLSSGVNRIQGTQPCISCMIHKEKAQALLEFLTPEDA
SAALFFDGRSFCGSILKIRRPKDFVEVGTGVAENSVAAVDRISDAVMDSPHKIFIGGISE
VISSEMLMEIAKAFGHLKAYRFVLNGDLNEPCAFLEYADHSVTAKACAGLNGMKLGGKVL
TVVQAIPDASLVGNVENRPYYGIPEHAKPLLESPTEVLKLKNVFDPMGLSEQELEEMMED
IRLECARFGTVKSINVTKQSKCPPTLETVEAIGNGTLTKNDHKTDRVESLQESTHFELEE
AGRLPPLKTNEEPMEAHSTDISKRSCDDKAGITEPSHGSEEDGNASKLGDNPIEDKPAEC
LNEVSSSELVADHSNDYVNPANDQVEIINRIDSPSSAKELQVDDELLTKDDLKSNEYDGK
LEASSDELQSSLKKDSDASPADKEIKETDHNLEHIFEPGCVLIEYRRAEASSMAAHCLHG
RVFDDRIVSVEYVAHDLYLKKFCR
NT seq 2955 nt   +upstreamnt  +downstreamnt
atgggcagatccagtctgggaaaagagatgaatgcaagcaataatgcatcttctcagagc
aaaagcgacgagggaacttcagctaggacaagacctttcacatgtgctgaaattatgctt
agacggaaaaacaagaaagatattgaggaaatcaaggatagttctgtaggtgctgctgtt
gtattagataaagaaaactctgtcaacaggacttttgatagtttgggatctgacaggtat
tgtgatgtttccataccaagtagtgtgaggcataattcaaaggattctcagttaacttca
agaagggaagaaagtgatgataaggcaaggaaagttgcaaggttcaagaaaaaagaaatt
agagagacagaaaccaaacggggggaggcagttagcaatgatacaagtggcaagaatata
agtggatacaaaattgatagagctcctcatggtgggaggacaaaggatgataagtctaat
gatggttccaaaaataaacatggtaacaaacatgtaaatgatttggccaggaaggacata
ttgactgacaaaggtagtaaaatatatgagaaggaaagaaaagaaaaacatcatgataag
gacagcagacaggtgtacaggaagagaacaaatgatgaattgccaagtaatgcttctgag
gatgaatctgagaagagacattcaagaaattattcaagtacaaataggtataaaggcaaa
aacaaagaaaaatccgaaaaagaaaccaaaagaaaacaccaacatgaagatgaagagaaa
gctaaggacaggaatgctgataaaaaacatgattcatcaaaactaagagtttctgagttt
ccagaaaagaaggattcaaagcgatctcatcatgaagatttaaggcaaaaaagaagacga
tcaaggagcagagagcgtgataaagaaagtcatagaaagtcccgctcaccttctccaaag
gcacacaagcattcatcacatgatgtcagagatcgtactgaaacctactcacattcttca
aaagataaatctggaagatcaaattctgattttgataagaagaggatatccaacaatggt
gaaactgctcattataagcggcattcagggtcagcaagtgggcttggtggctattcacca
agaaagaggaaatcagaagctgctgctaaaactccatctccaactagccgctctccagag
aggagaattgcaggttgggatctcccacctgcagcaacagagaaaaatattcctgctcct
gttctttctagtttgccatcttcttcacagtcagtatcattgagcacacttgagtcattt
gtagtggctcctggcagtctgtttgcaacaaaacctgctgtgtttttcccaaatagttat
cctccattagtgcatgctgttgaatcaatccagctaacacaagcaacgcggcctatgaga
acgctttatgtagaaaacttgccaaattcagcatctgataaagatgttatggaatgcttc
aataaatttctgctgtcctcaggtgtcaaccgtattcaaggaacacagccctgtattagc
tgtatgatacacaaggagaaagcccaagctctcctagaatttttgacacctgaggatgct
tctgctgcacttttctttgatgggagatccttctgcggctcaattcttaagatcaggcgt
cctaaagattttgttgaagtgggaactggtgttgcagaaaattcagtggctgcagttgat
aggataagtgatgctgtaatggattcacctcataagatttttataggtggaatctcagaa
gttatttcatctgaaatgcttatggagattgctaaagcctttggacatctgaaagcatac
cgctttgtgttgaatggagatcttaatgaaccatgtgcttttcttgagtatgctgaccat
tcagttactgctaaagcttgtgctggtcttaatggaatgaaattgggtggaaaagtacta
acagttgttcaagctattccagatgcttcacttgtgggaaatgttgagaatcgtccttac
tatgggattccagagcatgcaaagccacttttggaaagtcccacagaagtactgaagctg
aaaaatgtgtttgatcctatgggattgtcagaacaagaacttgaagaaatgatggaagat
attaggctagaatgtgccaggtttggtactgtgaaatctattaatgtcacaaagcagagc
aaatgcccccccacattggaaactgttgaagcaataggcaatggaactcttaccaagaat
gatcacaagactgatagagtagaatcattacaagaaagtactcattttgagttggaagaa
gctggcaggttgccacctctcaagactaatgaagagcccatggaagcacattcgactgac
attagcaagaggtcatgcgatgataaagcaggcataaccgaaccttcacatggctctgag
gaagatggaaatgccagtaagcttggtgacaatcctattgaggataaacctgcagaatgc
cttaatgaagttagtagctctgaactagtggctgatcatagtaatgactatgtcaatccc
gctaacgatcaagtggaaatcattaatagaattgatagtccgagttcagcaaaggagctt
caggtggatgatgagttacttacaaaggatgatttaaaatcaaatgaatatgacgggaag
ttagaggcttcttctgatgaattacaatcatccttgaaaaaggattcggatgcttctcct
gcagacaaagaaataaaggaaacagatcataatctcgagcatatctttgagcccggctgt
gttctaatagagtatagaagagcagaagcttcaagcatggctgcacattgtttacatggt
cgagtctttgatgatcggattgtgagcgtggaatatgtcgcgcatgatctgtacctgaag
aagttttgcaggtag

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