Ipomoea triloba (trilobed morning glory): 116016345
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Entry
116016345 CDS
T07384
Name
(RefSeq) RNA-binding protein BRN1-like
KO
K13207
CUG-BP- and ETR3-like factor
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
116016345
Spliceosome [BR:
itr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116016345
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
BRAP2
RRM_occluded
RRM_MARF1
GHMP_kinases_C
Motif
Other DBs
NCBI-GeneID:
116016345
NCBI-ProteinID:
XP_031112424
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All DBs
Position
4:29032833..29036843
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AA seq
434 aa
AA seq
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MAEGEKQPRKHSEESVKLFVGQVPKHMTEAQLLAMFKEFAIVDEVNIIKDKATRASRGCC
FVICPSREEADKAVNACHNKKTLPGAASPLQVKYADGELERLEHKIFVGMLPKNVSDAEV
SGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETREQAVAAIEAINGKHKMEGSTVPLVVK
WADTEKERQARRAQKALSQTSNMPDSGQHPSLYGPLPMGYMAPYNGYGYQSPGTYGIMPY
RLPPLQNQHTFQNMIPTLNQGNTLRGTTPDISPGLTPRNYAMSPTSYVGSTYPGIPGVQY
PIPYPGGFMSNRPSSSSGAVHPSTSNSQSAASSSVNSNLGAQAEGPPGANLFIYHIPQEF
GDQELANVFQPFGRILSAKVFVDKATGVSKCFGFVSYDSPAAAQTAISRMNGFQLSGKKL
KVQLKRDNKQSKPY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggggagaagcagccgaggaagcacagcgaagagagtgtgaagctgttcgta
ggtcaagtgccgaagcacatgacggaagcgcagctgctcgcaatgttcaaggagttcgct
atcgttgacgaagtcaacatcatcaaagacaaggctactcgagcttctcgagggtgttgt
tttgtgatctgtccctcaagagaagaagctgacaaggctgtaaatgcctgccacaataag
aagactcttcctggggctgctagtccattgcaagtgaaatatgctgatggcgagttggaa
agactagaacacaagatttttgtcgggatgctaccaaagaatgtatcagatgccgaagtg
tctggcttattctctcaatatggaaccattaaggacttgcaaattttaagaggttctcag
caaactagtaaaggatgtgcatttttgaaatatgagacaagagaacaagcagttgcagct
atagaggccattaatggaaagcacaagatggagggttcaacggttcctttagtggttaaa
tgggcagacacagaaaaggaaagacaagctcgtagggctcagaaagctctatcacagaca
tctaatatgcccgactctggacagcatccatctctatatggacctttacctatgggttat
atggcaccatacaatggatatggttatcagtctcctggaacttatggaatcatgccgtat
cgcctaccaccactccagaatcaacatacattccagaatatgattccaactttaaaccaa
ggaaatacactacgtggcaccacaccagatatttcacctggtttgacgccaagaaattat
gccatgtcacctacaagttacgtaggatctacttaccctggcatacctggggtacagtat
cccatcccatatcctggaggattcatgagtaatagaccttcgagtagttctggtgctgta
caccctagcacctcaaacagtcagtctgcagcatcttcaagtgtcaactcaaatttgggg
gctcaggctgaaggtccaccgggtgctaatttatttatttaccatattccacaagaattt
ggtgaccaagagcttgcaaatgtatttcagccttttggtaggatcttgagtgctaaggtt
tttgttgacaaggcaactggcgttagcaaatgttttgggtttgtcagctacgactctcca
gcagctgcacaaacggcaatcagcaggatgaatggcttccaattaagtggtaaaaaattg
aaggttcagcttaaaagagacaataaacaaagtaaaccttattga
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