Ipomoea triloba (trilobed morning glory): 116016380
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Entry
116016380 CDS
T07384
Name
(RefSeq) YTH domain-containing protein ECT4-like
KO
K20102
YTH domain-containing family protein
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116016380
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116016380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
ANAPC_CDC26
Motif
Other DBs
NCBI-GeneID:
116016380
NCBI-ProteinID:
XP_031112480
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All DBs
Position
4:27630273..27634520
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AA seq
704 aa
AA seq
DB search
MASVTAPADQAADLLQKLSLESKPNTLEIPEPTKKASVDSTDVANGQTQSGDRSLTPLLP
DFIDPAVCYVPNGYPYTAYHYGAYDGTGNEWENYPRYLNQDGVEMPGVYGDNGSLLYHHG
YGYAPYAPYSPATSPVPTVGQDGQLYGAQQYQYPAPYFQPMTPTSGAYATPAAPAKGEIQ
TSAAVDEAPLSVDSAKGNPNDIANGGAVKGTNGSAPVRPFYQNSSFNANANGSFGRGTLP
GGFASGYHDPRFAYDGLRSPIPWLDVTSFSDGQPRPVSSGPITSASNNSSSRNPSIRPHL
MGLHHPRPISGMNATNGYANRMYPNKLYGQYGNTYRSGVGYSSNGYDSRTASRGWLSVDN
KFKPRGGRGSSYYGYGNENMDGLNELNRGPRGKGSKTQKGFTPVALAVKGQNIPLTKTND
DEKEKSSLVPDRDQYNCSDFPVTYDDAKFFIIKSYSEDDVHKCVKYNVWASTPNGNKKLN
EAYQEAQQKSGGCPIFLFFSVNTSGQFVGVAEMIGPVDFNKKVEYWQQDKWIGCFPVKWH
IVKDVPNSLLKHITLENNENKPVTNSRDTQEVKLEQGLQVLKIFKDHASKQCILDDFEFY
EDRQKRIQEKKAKQQLYQNQVWEGKTTDEKKETTNGEQKPQTPTEVVSEELNKEATPAEQ
VNGDAKVVENGSAAKSGDVMKGDNQVVSSDNKAIIANGVVNGCC
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgttactgctcccgctgatcaagctgcagatttgctccagaagttgtcactg
gaatcaaaacccaatactttggaaatccctgaaccaaccaagaaggcctctgttgactcc
actgatgtggcaaatggtcagacccagtctggtgacaggtctttgacacctttgttacca
gattttattgatccagcggtgtgctatgttcctaatggctatccttacactgcgtatcac
tatggagcatatgatgggacaggcaatgagtgggagaactatccaagatatcttaatcaa
gatggagttgagatgcctggagtatatggggacaatggatcccttttgtatcaccatggg
tatggttatgctccgtatgccccttactcacctgctacttctcctgttccaactgtggga
caagatggccagctgtatggggctcaacagtaccagtatccagctccatatttccagccc
atgactccaacaagtggtgcttacgctactccagctgccccagccaaaggtgagatacaa
acctctgcagctgttgatgaagcacctttgtctgtggattctgctaaaggaaatcctaat
gacattgcaaatggtggtgccgtaaagggaacaaatggctcagcacctgtgagacctttt
taccagaattcgtccttcaatgcaaatgcaaatggctcatttggaagaggtacattgcct
ggtgggtttgcttctggatatcatgatccaaggtttgcctatgatggattgcgatctccc
atcccatggttagatgtaacatcattttcagatgggcagcctagaccagtatccagcggt
ccaattacctccgcaagcaataacagttcatcaaggaacccgagcattcgtcctcatctg
atggggttgcatcatcctaggcctatatctggaatgaatgctacaaatggatatgccaat
agaatgtatccaaacaaattgtatggtcagtatggaaacacatatagatctggtgtaggc
tatagttctaatggttatgattcacgcactgccagtcgtggttggttgtctgtagataac
aagtttaagcctaggggtggtagaggaagtagttactatgggtatgggaatgagaacatg
gatggtttgaatgagctgaacaggggaccacgaggtaaaggttccaaaacccagaagggt
tttacaccagttgctctggcagttaaagggcagaacattccattgaccaaaacaaatgat
gatgagaaagagaaatcaagccttgtccctgacagagatcaatacaactgctcagatttt
cctgtgacttatgatgatgccaagtttttcattatcaagtcttacagtgaagatgatgtc
cacaagtgtgtcaaatacaatgtgtgggctagcactcctaatggtaacaagaagctcaat
gaagcataccaggaggctcagcagaagtctgggggctgccctattttcctcttcttttcg
gttaataccagtgggcaatttgttggtgttgctgagatgatcggtccagttgatttcaac
aagaaggttgagtattggcaacaggacaaatggattggctgttttcctgttaagtggcac
attgtgaaggatgtcccgaacagcttattgaagcacataaccctggaaaacaatgaaaac
aaaccagtgaccaacagcagagacactcaagaggttaaattggagcaaggcctacaagtc
ctcaagatattcaaggaccatgctagtaaacaatgtatactagatgattttgaattctac
gaggatcgtcagaagagaattcaagagaaaaaggctaagcaacagctttaccagaatcag
gtgtgggaagggaagaccacagatgagaagaaagaaactactaatggagaacaaaagcct
cagacaccaactgaagttgtatctgaagagctgaacaaggaagcaacccctgctgaacag
gtaaatggggatgccaaagttgtagagaatgggtcagctgcaaaatctggagatgttatg
aagggcgataatcaggttgtgtcatcagacaataaggcaatcatcgcaaatggggttgta
aatggctgctgctag
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