Ipomoea triloba (trilobed morning glory): 116016397
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Entry
116016397 CDS
T07384
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03010
Ribosome
itr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
116016397
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116016397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
itr03011
]
116016397
04121 Ubiquitin system [BR:
itr04121
]
116016397
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
itr04147
]
116016397
Ribosome [BR:
itr03011
]
Ribosomal proteins
Eukaryotes
Small subunit
116016397
Archaea
116016397
Ubiquitin system [BR:
itr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
116016397
Exosome [BR:
itr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116016397
Exosomal proteins of colorectal cancer cells
116016397
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Plexin_RBD
Dsc3_N
DUF2604
UBL_UBAC1
TBK1_ULD
Thioredox_PDIA6_C
OTU1_UBXL
Fer2_3
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
116016397
NCBI-ProteinID:
XP_031112501
LinkDB
All DBs
Position
1:complement(38051181..38051967)
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctgacggggaagacgataaccctagaggtggagtcatcg
gacaccattgacaatgtgaaggcgaagatccaggacaaggagggcatcccgccagaccag
cagcgcctcatcttcgccggaaagcagctcgaggacgggcgcacccttgcagactacaac
atccaaaaggagtctaccctccacctcgtccttcgcctccgcggcggggcaaagaagcgc
aagaagaagacctacacgaagcccaaaaagattaagcacaaacacaagaaggtgaagctc
gccgtcctgcagttctacaaggttgatgattctggaaaagtacagaggctccgtaaagag
tgccccaacgcggagtgcggtgctggcacattcatggccaaccattttgacaggcactac
tgtggcaaatgtgggcttacctatgtctatcagaaggccggcggtgactga
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