Ipomoea triloba (trilobed morning glory): 116016436
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Entry
116016436 CDS
T07384
Name
(RefSeq) adagio protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
116016436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116016436
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116016436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_5
Kelch_1
Kelch_6
PAS_9
NANM
F-box-like
PAS_3
F-box
PAS
PAS_4
Motif
Other DBs
NCBI-GeneID:
116016436
NCBI-ProteinID:
XP_031112552
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Position
4:16211120..16215187
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AA seq
625 aa
AA seq
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MEESEEEEELGYRGKRLKFAGNDRMLEDEAEGEKEDRPKLREHGGGIFLYPMLATPSSIV
VSDAMEPDLPIIYVNTFFEISTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVSEIR
RCLEEGVEFQGELLNFRKDGTALVNKLRLAPIHSDDGTVTHIIGIQMFSEAKIDLNTVSY
PVFKETCLLQSDEATKYSINSGQLEHYQHKEMCGILQLSDEVLAHNILSRLTPRDVASIG
SVCRRIRQLTKNEHVRKMVCQNAWGRDVTGALELMTKKLGWGRLARELTTLEAVCWKKLT
VRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRRVSVKSSPPG
RWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWKEVSGATPPLPRSWHSSCT
IEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPKWREIPTSWAPPSRLGHSLSVYGRTKIL
MFGGLAKSGHLRLRSGEAYSIDLEDEEPRWRQLECGAFTGQGSQNVVVPPPRLDHVAVTM
PCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRTLNVPGQPPKFAWGHSTCVVGGTRVL
VLGGHTGEEWILNELHELCLASRQD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagcgaagaggaggaggagcttgggtaccgagggaagaggctgaaattcgct
gggaatgacaggatgctagaagatgaagcggaaggggaaaaagaagataggccgaaactg
agagagcatggtggtgggattttcttatacccgatgcttgccacgccgtcttcgatcgtc
gtctccgacgccatggagcccgacctacccatcatctacgtcaacaccttcttcgaaatc
tccaccggctatcgcgctgacgaagtcctcggccgcaattgtcggtttttacaatataga
gatccccgggctcaaagacggcatcctctggtagatcctgttgttgtttctgagatcaga
agatgtcttgaagaaggtgtggagttccaaggtgagcttctcaactttaggaaggacggt
actgcattagtgaacaagttaagacttgcacctatacatagtgatgatggcacagttaca
catatcattgggattcagatgttttctgaagcaaaaatagatctaaatactgtgtcatat
cctgttttcaaagaaacatgcttgctgcaatctgatgaagctaccaaatactcgattaat
agtggacagttggagcattatcagcacaaggaaatgtgtgggattcttcagctatctgat
gaagttcttgctcacaacatcctatcacgcttaactccaagggatgtagcatccattgga
tctgtttgcagaaggattcggcaattaaccaaaaatgagcatgtcaggaaaatggtatgc
caaaatgcatggggaagagatgtcacaggagcccttgaactcatgactaaaaagttaggt
tggggtcgtctggctagggagctaactacacttgaagctgtttgttggaagaaacttaca
gttagaggtgcagttgagccatcacgctgcaatttcagtgcatgtgctgcaggtaatcgg
cttgtcttgtttggaggggaaggtgtcaatatgcagccaatggatgacacatttgttctc
aatcttgatgctgccaatccagagtggcgcagggtaagtgtgaaatcttctccacctgga
cgatggggccatactctttcatgccttaatggttcttggttggttgtttttggtggctgt
gggaggcaagggttgctcaacgatgtctttgttcttgatttggatgccaaacaaccaaca
tggaaagaagtctcaggagcgactcccccgcttcctaggtcgtggcacagttcttgcaca
atagaaggctcaaaattagttgtttcaggtggatgcacagatgcgggagtactccttagt
gatacgtatctgttggatctcactacagacaaaccaaagtggagagagattccaacatct
tgggctcctccttcaagattggggcactcgctctctgtctatggaaggacaaagattcta
atgtttggtgggcttgccaaaagtgggcacttgcgcttaaggtctggtgaggcatacagc
attgatttggaggatgaagagccacgttggaggcagctcgagtgtggtgcattcactggg
caaggaagccagaatgtggttgtgcctccgcctagacttgatcatgttgctgtaaccatg
ccttgcgggcggataataatctttgggggttcaattgccgggcttcattctccatcacag
ctgtttttgctggatccttccgaggagaaaccttcatggaggactctgaatgttcctggg
caacctccaaaatttgcgtgggggcatagcacgtgtgtagttggtggaacgagagtgttg
gtccttgggggtcataccggggaagaatggattcttaacgaactgcatgaactctgctta
gccagcaggcaagactga
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