Ipomoea triloba (trilobed morning glory): 116016446
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Entry
116016446 CDS
T07384
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116016446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116016446
03009 Ribosome biogenesis [BR:
itr03009
]
116016446
04131 Membrane trafficking [BR:
itr04131
]
116016446
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
itr04147
]
116016446
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116016446
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116016446
Membrane trafficking [BR:
itr04131
]
SNARE
SNARE associated proteins
Others
116016446
Autophagy
Aggrephagy
Other aggrephagy associated proteins
116016446
Exosome [BR:
itr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116016446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_5
AAA_2
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
Mg_chelatase
nSTAND3
AAA_28
AAA_18
AAA_17
ATPase_2
Parvo_NS1
IstB_IS21
Viral_helicase1
ABC_tran
AAA_7
NB-ARC
AAA_24
TsaE
AAA_lid_PRS2_C
NACHT
Vps4_C
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
116016446
NCBI-ProteinID:
XP_031112565
LinkDB
All DBs
Position
4:complement(33616621..33621499)
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AA seq
840 aa
AA seq
DB search
MSYPLLIAHSSVLASSPAKYLNFVFPVQESRSKMSHQAESSDSKSTKKDFSTAILERKKA
PNRLVVDEAVNDDNSVVALHPATMEKLQLFRGDTILIKGKKRKDTVVIALADDTCEEPKI
RMNKVVRTNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGVTGDLFESYLKPYFMEA
YRPLRKGDHFLVRGGMRSVEFKVIETDPGEYCVVAPDTEIFCEGEPVKREDEDRLDEVGY
DDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETG
AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERR
IVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRI
HTKNMKLAEDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILN
SMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKF
EKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIF
DKARGSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGAT
NRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDVDLRALAKYTHGFS
GADITEICQRACKYAIRENIEKDIEREKRRAENPDSMDEDDDDEVSEIKPAHFEESMKYA
RRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAESGGAGAASGSDPFATSNAAADEDDLYS
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacccccttctcatcgcgcactcatcagttctcgcttcttctcctgcgaaatat
ctcaatttcgtcttccccgttcaagaatctagatcgaagatgagtcaccaggccgagtca
tccgactcgaaaagtactaagaaggatttctctacagcgattttggagaggaagaaggcg
ccgaataggcttgtcgttgacgaggcggttaacgatgataactctgtcgttgctctacac
cccgccaccatggagaagctccagctcttccgcggggacacaattctgattaagggcaag
aaaaggaaagatactgtggttattgcccttgctgatgacacgtgtgaagaaccaaagatt
aggatgaacaaagttgtccggacaaatttgagggtccggcttggagatgttgtgtctgta
caccagtgtccagatgttaagtatgggaagcgtgtgcacatacttcccatagatgataca
attgaaggggttactggagatctttttgagtcatatttgaaaccttactttatggaagca
tatcgacctttgaggaaaggagaccatttccttgttagaggagggatgagaagtgtggaa
ttcaaggtcattgaaactgatcctggggaatattgtgttgttgctccagacactgaaata
ttctgtgagggggaaccagtgaagagggaggatgaggatagacttgatgaagttggctat
gatgatgttggtggagtaagaaaacaaatggctcaaattcgtgaattggtcgagctgccg
ttgaggcatccccaacttttcaaatcaattggtgtgaaaccacccaaggggattttgctt
tatggccctcctggttcgggaaagacacttatagcaagagctgttgctaatgaaactggt
gcatttttcttctgtatcaatggtccagaaattatgtccaagttagctggagagagtgaa
agcaatcttaggaaggcatttgaagaggctgaaaagaatgcaccatctatcatatttatt
gatgaaattgattcaattgcccccaagcgggagaagacacatggtgaagttgagagaaga
attgtctcacaactattgactctaatggatggactgaaatcccgtgctcatgttatagtt
attggagctacaaatcgtcccaacagtattgatcctgctctcaggagatttggtaggttt
gacagggaaatagacattggtgttccagatgaagttggacgtcttgaagttcttcgcatt
cataccaagaatatgaagcttgctgaagatgttgatctggagagaattgctaaagacact
catggatatgttggtgctgatcttgctgctctctgcactgaagctgcacttcaatgcatt
agagaaaagatggatgtcattgatctagaggatgaaacaattgatgctgagattttgaat
tccatggccgttacaaatgaacacttccaaactgctcttggaacaagcaatccttctgct
ttgcgtgagacagttgttgaagtgcccaatgtcagctgggaagatatcggaggccttgaa
aatgttaagagagagcttcaagagactgttcaatatcctgtggaacatccagagaaattc
gagaaatttggcatgtcaccttccaaaggtgttcttttctatggtcccccaggatgtgga
aaaactctactggccaaggcaatagcaaacgaatgtcaagccaacttcattagtgttaaa
gggccagaattgcttaccatgtggtttggagagagtgaggccaatgttcgagaaattttt
gacaaggctagaggatcagccccatgtgttctgttctttgatgagcttgactctattgcc
actcagaggggaagcagtgttggagatgctggtggtgcagctgatcgagttcttaaccaa
cttctgactgaaatggatggcatgactgcaaagaagactgttttcataattggggctacg
aatagacctgatataattgatcctgctcttcttcgccctggccgacttgatcagttaatt
tatattcctcttcctgatgaagattcacgccatcagatcttcaaggcttgccttagaaag
tctcctctttcgaaagatgttgatttgagagctcttgcaaaatacactcatggattcagt
ggagctgatattactgagatctgccaacgggcctgcaaatatgccataagggagaacatt
gagaaagatatagagagggagaaaaggagggcagagaatccagactccatggatgaggac
gatgatgatgaagtgtctgagattaagccagcacattttgaggagtctatgaagtatgct
cgtcgcagtgtcagtgatgccgatatacggaaatatcaagcatttgctcagaccttgcag
cagtctcgaggatttggaactgaattccggtttgcagagtcagggggagctggcgcggct
tctggatctgatccatttgcaacttctaatgctgctgctgacgaagacgacttgtatagt
tag
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