Ipomoea triloba (trilobed morning glory): 116016472
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Entry
116016472 CDS
T07384
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
itr03400
]
116016472
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
116016472
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
116016472
NCBI-ProteinID:
XP_031112603
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Position
4:4834205..4839216
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AA seq
1147 aa
AA seq
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MSSQSQLKPLSPQEWESLIDDYNHGGTRLFRWTAAHYSGTLLFELALSSIVRKDLPLNLK
LHLLIFLEEHSSTVIPSAAAAASFSRLIETLRSVVQSPNDGVSITFPLKEQFLISTTSIF
VTSNANGDSGSNTISSGLVPQFECLIELLLTIINRPNHSVDRQTRSVTCDCLRELEIAFP
CLLSDVASQLWSLSQSERTHAGQSYALLLATVVSNIVKLKPNASFTNASMPLVPFNVPSF
VIDDADNNATGEDKHSTEKQISDLSNKDLKRVVAFLLEWPHNLTSWGLLEFMDKILPVAA
ALDLQASLLKVQFSGLLSTYDPLLWHAYLVMCLRFLDSFEGQELEITRRLLLLSKESQHH
LVFRLLVLHWLLGFVGLVLNRDEGKRGNVLEMSLSFYPAVFDPLALKSLKIDLLAYCSIL
VIKGNGVVSTETSPKVSVEKLFEDALVSVSAFKWLPPWSTETAVAFRAFHKFLIGASSHS
EADSVSNRILTESTIFHTVQKTLVASMSEYKGMVPVTVTFIDRLLACHKHHLLGEHLLET
FDEHLLPKLKLDYRLGSYFPILEKIAVSSKVSPSGLLEHLVKFMLFLIKKHGPDTGLRSW
CHGSKVLGICRTMLMHHHSSKLFLGLSRLLAFTCLYFPDLEVRDNARIYLRMLICIPGKK
LRDMLNSGDQLPGVSPSTHSSPFFTVQSPRFSHDLKKSRNISSYIHIERVIPLLVKQSWS
LSLATLGIDNKKPGYLEAIRDTEPMSEHKEIDRNTDQSVSETYGTDRLPGVPEPLRVMDS
KICQIVDMLRRHFSSIPDFRHMPGLRIKIPCSLWFESEPFNRIWGTSMAANEFDGVDALP
AIYAAVLRFSSSAPYGTIPSYHIPFLLGQPPRSFNSFNENNSLEIVPVENSSYSPGAVEG
FNTHVLIELEPREPVPSLVDIFIEANTASGQIIQGQLHSITVGIEDMFLKAIPPDDISGE
AVPGYYVQLFNALWEACGTSTSTGRETFVLKGGKGVAAISGTRSVKLLEIPAASLIQSVE
QCLAPFVVCVTGELLINTVKGGEVIRDIVWGDTSPDSSIDDVSTQETSVVGGPLYLKYLD
DEDDGGGNAQITKKNMGCFQILIFLPPRFHLLFQMEVCDTSTLVRIRTDHWPCLAYIDDY
LEALFCL
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcaaagtcagctgaaaccgttaagccctcaagaatgggaatctctaattgac
gactacaaccacggcggcacgcggctgtttcgctggactgccgcacattactccgggacg
ctcctctttgagcttgctctctcctccatcgtccgcaaagacctccctctcaacctcaag
cttcatctcctcatcttcctcgaggagcattcatccactgtaattccatcggccgccgcc
gccgcctccttcagtcgactcatcgaaaccctccgctccgttgttcaatccccaaacgac
ggcgtttcgatcactttccctctcaaggaacagttcctcatctccaccacctccatcttc
gttacgtcgaacgccaatggtgatagcggatcgaatactatcagttcgggtctcgtgccg
caattcgaatgcctaatcgagcttctgttgacgataatcaaccgaccgaatcacagcgtg
gaccggcaaacccggtccgtgacctgcgattgcttacgcgagctcgaaatcgctttccct
tgcttactctcggacgttgcatcgcaactatggtctttatcacaaagcgagagaactcat
gccggtcagagctatgcgctgttactagccaccgtagtttcgaacattgttaagttaaaa
cctaatgcttcatttactaatgcttctatgcctttggttcctttcaatgttccttctttt
gtgattgatgatgctgataataatgctaccggggaggataagcattctactgagaagcag
atatcggatttgagtaacaaggacctaaagagagtggttgcatttttgcttgagtggcca
cataacttgacttcatgggggttattggagttcatggataagatattgcctgttgctgca
gccttggatttgcaggcttcattgttgaaggtgcagttctcgggactgctttctacatat
gatcctttgctttggcatgcatatttagtgatgtgtttgaggtttctggactcatttgaa
gggcaggagttggaaattacccgtagactgttgttgttgtcgaaagaatcacaacatcat
ttggttttcagattgctggtacttcactggttgttggggttcgttggactagtgctaaat
agagatgaggggaaaaggggaaatgttcttgaaatgagtttgagcttttatccagctgtt
tttgatccacttgctttgaagtccttaaaaattgacttgcttgcatactgctctattttg
gttattaaaggaaatggagtagtgagcactgagactagcccaaaagtgtcagtggagaag
ctatttgaagatgcccttgtttctgtatctgctttcaaatggttgcctccttggagcaca
gaaacagcagtggcatttcgtgccttccacaaattcctgattggtgcatcgtctcactca
gaagctgattctgtttccaacagaattctcactgaatccaccatcttccacactgtacag
aagacacttgtagcctctatgtctgaatataaaggaatggtccctgttactgtcaccttc
attgaccggttgctggcatgccataaacaccatttgttgggtgaacacctcctcgagacc
tttgatgagcatttacttcctaaactaaagctagactataggttgggatcttacttccca
atattggaaaaaattgctgtgagtagtaaagtttcaccaagtggattgttagagcacctt
gtgaagttcatgttgtttcttatcaagaaacatggtccagacacagggttgagatcttgg
tgtcatgggagtaaagttcttggcatttgtcgaacaatgcttatgcatcaccatagctct
aagttattccttgggctatctcgtcttctagcatttacttgcctttattttccagatttg
gaagttcgtgacaatgcaagaatctacttgcggatgctcatttgtattccagggaagaaa
cttagagacatgctgaacagtggggaccagttgcccggagtgtccccatctacccactct
agtccattttttactgttcagtctcctagattttcccacgacctcaagaaatcaaggaat
atatcatcgtatattcacattgagcgtgtgattccactgttggttaaacaatcttggtcc
ttgtcacttgcaaccctgggtattgacaacaagaaacctggttatttagaagccatcagg
gacactgaaccaatgagtgagcacaaggagatagatagaaatactgatcaatcagtctct
gaaacctatgggactgatcggctgccaggagtgccagagcccttacgtgtgatggattcc
aagatttgtcagatcgttgacatgttgaggaggcatttttcatctattcctgactttaga
cacatgccagggctcaggattaaaataccctgttccttatggtttgaatcagaaccattc
aatcgcatatggggtaccagtatggcagccaatgaatttgatggagttgatgcacttcct
gccatatatgcagcagttttaagattttcttcttctgccccgtatgggacaatcccatca
tatcatattcccttccttcttggtcagccccccagaagtttcaattctttcaacgaaaat
aattcattagagatagttccagtggagaacagttcttattctccaggagcagtggaaggc
ttcaacactcatgttctgattgaattggaaccacgggaaccggtgcctagtcttgttgac
atattcatcgaagcaaatacagccagtggtcaaatcatacaagggcagcttcatagtatc
actgtaggaatagaggacatgtttctcaaagccattcctccagatgatatcagtggagaa
gcagtacctggttattacgtacaattattcaatgctttgtgggaagcatgtgggacatcc
accagtactgggcgagagaccttcgtgttgaaaggaggcaaaggtgttgctgcaatcagt
ggaacccgatcagtgaaacttctggaaattccagcagcatctctgatccaatctgttgag
caatgcttagcaccctttgttgtctgtgtaaccggtgagcttcttattaacactgtgaaa
ggcggggaagttatcagggacattgtctggggggatacctctccagattcctcaattgat
gatgtctcgacacaagaaacaagtgtcgttggagggcctctttatctcaaatacctggac
gatgaagacgatggaggaggtaatgctcaaattactaagaagaacatggggtgctttcag
attctgatattcctgccaccaagattccatctcctcttccaaatggaagtttgtgatacc
tctactcttgtccggattagaactgatcactggccatgcttggcttacattgatgactat
ttggaagctttattttgtctatag
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integrated database retrieval system
